PDBsum entry 2vtb Go to PDB code:  Pore analysis for: 2vtb calculated with MOLE 2.0 PDB id 2vtb Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   24 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.36 28.2 -0.74 0.15 17.8 73 4 2 2 2 4 1 0  MHF 999 D 2 2.76 2.88 36.2 -1.50 -0.69 16.5 88 7 2 4 1 0 1 0  MHF 999 E 3 1.41 1.51 56.4 -1.91 -0.31 32.6 82 10 6 3 5 2 0 0  MHF 999 D 4 2.28 2.28 57.1 -2.38 -0.44 24.9 87 11 1 7 1 3 0 0   5 1.38 1.48 58.9 -2.28 -0.50 21.4 84 7 5 8 1 3 1 0  FAD 998 C MHF 999 C DT 2 I TCP 3 I DT 4 I 6 1.29 1.95 61.2 -1.45 -0.17 29.4 82 10 6 3 5 2 0 0  MHF 999 C 7 1.86 1.95 61.6 -2.11 -0.47 26.0 79 8 8 4 3 3 1 0   8 1.60 1.64 62.8 -2.04 -0.48 17.7 83 6 5 7 1 4 1 0  FAD 998 D MHF 999 D DT 1 J DT 2 J TCP 3 J DT 4 J 9 1.35 1.35 63.7 -1.23 -0.32 19.3 82 4 3 5 5 2 1 0   10 1.38 1.51 66.2 -2.16 -0.55 17.1 80 8 5 7 1 5 1 0  FAD 998 F MHF 999 F DT 2 L TCP 3 L DT 4 L 11 1.12 1.31 66.3 -1.88 -0.62 16.8 85 8 4 7 2 3 1 0  FAD 998 D DT 1 J DT 2 J TCP 3 J DT 4 J 12 1.42 1.42 66.9 -2.28 -0.53 21.6 83 7 6 10 1 3 1 1  FAD 998 E MHF 999 E DT 2 K TCP 3 K DT 4 K 13 1.39 1.41 68.6 -2.05 -0.51 18.9 83 6 6 9 1 4 1 1  FAD 998 E MHF 999 E DT 2 K TCP 3 K DT 4 K DT 5 K 14 2.22 3.19 71.1 -2.22 -0.61 24.6 87 10 6 8 1 3 0 0   15 1.29 1.29 79.0 -1.75 -0.42 20.6 86 13 4 8 4 2 1 0   16 1.45 1.53 89.2 -1.89 -0.39 29.3 82 10 8 5 6 4 0 0  MHF 999 D 17 1.06 1.26 92.9 -2.24 -0.57 23.4 87 11 6 11 3 3 1 0  FAD 998 C DT 2 I TCP 3 I DT 4 I 18 1.37 1.42 93.9 -2.20 -0.61 20.9 88 10 8 10 1 4 0 0  FAD 998 E CL 1499 E DT 2 K TCP 3 K DT 4 K DT 5 K 19 1.29 1.61 94.1 -1.55 -0.25 27.6 82 10 8 5 6 4 0 0  MHF 999 C 20 1.40 1.39 96.7 -2.38 -0.52 25.1 86 18 4 11 2 4 0 0  FAD 998 E CL 1499 E DT 2 K TCP 3 K DT 4 K DT 5 K 21 1.30 1.28 105.3 -1.69 -0.33 25.4 82 14 9 5 9 3 1 0  MHF 999 D 22 1.29 1.29 110.3 -1.53 -0.27 24.9 82 14 9 5 9 3 1 0  MHF 999 C 23 1.25 1.32 119.3 -1.89 -0.48 25.4 81 9 11 8 8 4 1 0   24 1.12 1.37 124.4 -1.90 -0.52 21.9 84 17 9 11 4 5 1 0  FAD 998 F DT 2 L TCP 3 L DT 4 L 25 1.17 1.36 152.0 -2.25 -0.60 25.1 85 17 13 12 2 6 1 0   26 1.15 1.32 171.2 -2.12 -0.49 25.8 86 19 8 13 5 5 1 0   27 1.27 1.27 52.3 -1.54 -0.25 29.6 84 8 4 2 5 1 0 0  MHF 999 A 28 1.41 1.46 58.6 -2.17 -0.54 21.4 83 6 6 9 1 3 1 1  FAD 998 A MHF 999 A DT 2 G TCP 3 G DT 4 G 29 1.20 1.33 61.6 -1.81 -0.61 16.8 89 7 3 7 2 2 1 0  FAD 998 B DT 2 H TCP 3 H DT 4 H 30 1.40 1.46 74.1 -2.12 -0.40 19.5 84 6 5 9 1 4 1 0  FAD 998 B MHF 999 B DT 1 H DT 4 H 31 1.30 1.25 76.4 -1.91 -0.43 30.1 86 13 6 7 6 2 0 0  MHF 999 A 32 1.18 1.40 77.5 -2.10 -0.53 20.9 88 10 4 9 2 3 1 0  FAD 998 B DT 1 H DT 4 H 33 1.21 1.42 89.0 -2.10 -0.60 24.9 88 16 7 13 3 2 1 0  FAD 998 A DT 2 G TCP 3 G DT 4 G Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.