PDBsum entry 2vl5 Go to PDB code:  Pore analysis for: 2vl5 calculated with MOLE 2.0 PDB id 2vl5 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 3.73 3.73 30.7 -0.53 -0.44 8.3 81 0 3 1 3 0 4 0   2 2.85 2.85 44.6 -1.45 -0.56 17.1 93 4 2 7 2 0 0 0   3 1.81 1.82 57.3 -0.11 -0.18 3.8 71 0 1 2 3 1 3 0   4 1.80 1.80 64.2 -0.27 -0.17 4.6 72 0 1 4 4 1 3 0   5 1.97 1.96 81.3 -0.65 -0.34 7.6 84 1 3 6 5 2 4 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.