PDBsum entry 2vl5 Go to PDB code:  Tunnel analysis for: 2vl5 calculated with MOLE 2.0 PDB id 2vl5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 3.00 18.7 0.12 -0.26 5.0 90 1 0 4 3 0 0 0   2 1.34 2.97 19.8 -0.07 -0.36 5.2 84 1 0 3 3 1 0 0   3 1.34 2.96 20.6 0.11 -0.28 5.0 90 1 0 4 3 0 0 0   4 1.31 2.99 21.4 0.02 -0.35 3.2 94 1 0 5 2 0 0 0   5 1.12 1.31 21.9 -0.17 -0.41 7.1 76 0 2 3 4 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.