PDBsum entry 2v4j Go to PDB code:  Pore analysis for: 2v4j calculated with MOLE 2.0 PDB id 2v4j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 14 pores, coloured by radius 14 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.49 33.7 -2.05 -0.36 23.9 75 6 5 1 0 3 1 0   2 1.56 1.56 41.3 -0.66 -0.38 9.6 87 1 2 4 6 1 4 0   3 1.39 1.45 47.1 -0.51 -0.34 14.0 82 5 4 1 5 1 1 0   4 1.32 1.49 49.9 -2.32 -0.35 24.9 76 10 5 3 0 4 1 0   5 1.33 1.33 52.0 -0.69 -0.36 12.7 87 3 4 4 5 1 2 0   6 1.35 1.36 57.8 -0.31 -0.36 9.5 79 4 1 2 4 3 4 0   7 1.26 1.26 68.7 -0.89 -0.20 17.4 88 5 4 3 9 0 1 0   8 1.29 1.28 70.1 -0.84 -0.36 12.0 81 3 6 5 6 2 3 0   9 1.43 1.45 69.7 -0.71 -0.28 14.0 85 4 3 3 12 1 3 0   10 1.15 1.26 70.6 -0.80 -0.25 17.7 80 5 5 1 11 0 3 0   11 1.18 1.33 83.7 -0.82 -0.31 14.2 79 4 4 3 10 2 4 0   12 1.35 1.37 95.1 -1.28 -0.27 22.8 78 10 6 1 12 0 3 0   13 1.42 1.44 118.2 -1.30 -0.44 19.8 80 9 7 3 5 2 1 0   14 1.32 1.51 27.0 -1.72 -0.56 19.6 67 3 3 0 0 1 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.