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PDBsum entry 2rd5
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Pore analysis for: 2rd5 calculated with  MOLE 2.0
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PDB id
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2rd5
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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0 pores,
coloured by radius |
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5 pores,
coloured by radius
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5 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.50 |
2.28 |
40.8 |
-0.57 |
0.02 |
20.3 |
81 |
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3 |
2 |
0 |
4 |
0 |
1 |
0 |
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ADP 2000 A
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2 |
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1.30 |
1.33 |
25.5 |
-0.21 |
-0.40 |
10.2 |
85 |
2 |
2 |
1 |
3 |
1 |
0 |
0 |
ATP 1000 C MG 1001 C
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3 |
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2.20 |
2.17 |
38.6 |
-1.53 |
-0.61 |
18.2 |
80 |
4 |
1 |
1 |
2 |
1 |
0 |
0 |
ATP 1000 C MG 1001 C
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4 |
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1.21 |
1.71 |
47.3 |
-1.26 |
-0.63 |
15.6 |
87 |
4 |
3 |
2 |
3 |
0 |
0 |
0 |
ATP 1000 C MG 1001 C
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5 |
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1.44 |
1.60 |
62.1 |
-1.61 |
-0.29 |
24.9 |
83 |
7 |
3 |
3 |
5 |
1 |
1 |
0 |
NLG 2001 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program