PDBsum entry 2rd5 Go to PDB code:  Tunnel analysis for: 2rd5 calculated with MOLE 2.0 PDB id 2rd5 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   6 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 2.61 16.7 -2.48 -0.70 31.8 83 2 3 1 2 0 0 0   2 1.23 1.40 15.3 0.07 -0.25 10.7 91 1 2 0 3 0 0 0   3 1.24 1.39 16.6 -0.29 -0.34 11.0 90 2 2 0 3 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.