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PDBsum entry 2qqk

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2qqk calculated with MOLE 2.0 PDB id
2qqk
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.60 2.37 25.0 -1.81 -0.42 17.0 79 3 2 1 2 1 1 0  
2 1.35 1.35 33.3 -1.47 -0.59 10.8 82 2 3 3 3 1 2 0  
3 1.80 1.82 50.9 -0.82 -0.16 12.0 77 2 2 2 2 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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