PDBsum entry 2qla

Pore analysis for: 2qla calculated with

MOLE 2.0

PDB id

2qla

Pores calculated on whole structure

Pores calculated excluding ligands

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11 pores, coloured by radius

11 pores, coloured by radius

11 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.12

1.14

25.9

-2.04

-0.33

26.5

81

6

2

1

2

0

1

0

2

1.27

1.56

26.9

0.39

0.07

8.3

77

2

1

3

5

1

0

2

HEM 152 C

3

1.44

2.99

44.2

-0.74

-0.06

19.8

80

6

3

3

8

1

0

2

HEM 152 C

4

1.31

1.56

49.3

-0.80

-0.38

8.9

87

5

1

7

7

0

0

0

5

1.29

1.56

52.4

-1.12

-0.24

15.7

85

5

4

6

8

0

0

0

6

1.36

2.12

56.7

-0.93

-0.25

14.2

84

6

2

7

5

0

1

0

7

1.62

1.62

61.3

-0.30

-0.16

8.3

82

7

0

7

8

1

0

2

HEM 152 C

8

1.11

1.16

61.3

-1.19

-0.21

19.9

83

9

6

5

8

0

1

0

9

1.38

2.13

64.4

-0.33

-0.01

12.2

82

7

2

6

9

1

0

2

HEM 152 C

10

1.48

1.48

79.2

-1.40

-0.44

18.3

83

6

2

1

5

0

2

0

11

1.20

1.21

81.5

-0.46

-0.14

12.8

82

11

5

8

11

1

1

2

HEM 152 C

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.