 |
PDBsum entry 2qla
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 2qla calculated with  MOLE 2.0
|
PDB id
|
|
|
|
2qla
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Tunnels calculated on whole structure |
|
Tunnels calculated excluding ligands
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
|
|
7 tunnels,
coloured by tunnel radius |
|
10 tunnels,
coloured by
tunnel radius
|
10 tunnels,
coloured as in
list below
|
|
|
|
|
|
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
|
|
|
|
|
Free R
|
|
|
|
|
|
|
Length
|
|
|
|
|
|
|
HPathy
|
|
|
|
|
|
|
HPhob
|
|
|
|
|
|
|
Polar
|
|
|
|
|
|
|
Rel Mut
|
|
|
|
|
|
|
Residue..type
|
|
|
|
|
|
|
Ligands
|
|
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.56 |
1.91 |
44.3 |
0.10 |
-0.11 |
8.7 |
82 |
|
3 |
3 |
5 |
9 |
1 |
0 |
0 |
|
|
 |
|
2 |
 |
1.29 |
1.50 |
44.6 |
-0.11 |
-0.17 |
10.7 |
84 |
3 |
3 |
5 |
8 |
1 |
0 |
0 |
|
|
3 |
 |
1.30 |
1.56 |
46.1 |
0.10 |
-0.16 |
7.8 |
83 |
3 |
3 |
5 |
10 |
1 |
0 |
0 |
|
|
4 |
 |
1.41 |
2.11 |
46.3 |
-0.06 |
-0.24 |
9.2 |
84 |
3 |
2 |
5 |
8 |
1 |
0 |
0 |
|
|
5 |
 |
1.42 |
2.99 |
48.8 |
-0.41 |
-0.14 |
14.7 |
81 |
6 |
4 |
5 |
8 |
1 |
1 |
0 |
|
|
6 |
 |
1.39 |
2.13 |
52.0 |
-0.23 |
-0.07 |
14.9 |
80 |
5 |
4 |
5 |
7 |
1 |
1 |
0 |
|
|
7 |
 |
1.62 |
1.62 |
53.0 |
0.66 |
0.06 |
6.7 |
80 |
3 |
2 |
6 |
10 |
2 |
0 |
2 |
HEM 150 A
|
|
8 |
 |
1.61 |
1.62 |
58.1 |
0.41 |
0.00 |
7.3 |
80 |
5 |
2 |
5 |
11 |
2 |
0 |
2 |
HEM 152 C
|
|
9 |
 |
1.56 |
1.60 |
60.1 |
0.32 |
0.03 |
8.3 |
78 |
5 |
3 |
4 |
11 |
3 |
1 |
1 |
HEM 152 C
|
 |
10 |
 |
1.12 |
1.17 |
61.4 |
-0.41 |
-0.11 |
15.8 |
81 |
8 |
5 |
5 |
9 |
1 |
1 |
0 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
 |
Residue-type_colouring |
 |
|
|
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
|
MOLE 2.0 program