PDBsum entry 2qb9 Go to PDB code:  Pore analysis for: 2qb9 calculated with MOLE 2.0 PDB id 2qb9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 31 pores, coloured by radius 31 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.99 2.99 38.1 -0.59 -0.82 6.2 92 0 1 0 0 0 0 0  A 452 A G 453 A G 454 A G 455 A A 456 A G 457 A U 458 A A 459 A A 460 A A 461 A G 462 A U 463 A U 464 A A 466 A U 467 A A 468 A C 469 A C 470 A U 471 A U 472 A U 473 A G 474 A C 475 A U 476 A C 477 A U 479 A 2 2.53 2.53 56.1 -0.77 -0.74 8.3 89 2 0 1 0 0 0 0  G 668 A G 669 A G 670 A G 671 A U 672 A A 673 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A G 809 A C 810 A C 811 A LLL 2358 A 3 1.83 1.83 63.3 -1.01 -0.76 11.1 82 4 1 0 0 0 0 0  C 580 A G 581 A C 582 A A 583 A G 584 A G 587 A U 653 A G 654 A A 655 A G 656 A A 743 A C 744 A G 755 A C 756 A U 757 A C 758 A U 762 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A 4 1.70 1.70 79.0 -0.20 -0.69 3.2 103 0 0 0 1 0 0 0  A 53 A C 54 A A 55 A U 56 A C 58 A A 59 A C 233 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A C 314 A A 315 A C 316 A G 319 A A 320 A A 321 A C 328 A A 329 A C 330 A G 331 A U 333 A C 334 A U 340 A C 341 A A 349 A G 350 A G 351 A C 352 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A MG 2044 A 5 2.20 2.33 86.7 -1.07 -0.65 13.7 87 7 1 0 2 0 0 0  A 120 A U 121 A G 122 A G 237 A U 252 A A 253 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A C 277 A G 278 A C 280 A G 281 A A 282 A U 283 A A 320 A A 321 A G 581 A C 582 A A 583 A G 584 A U 762 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A 6 1.30 2.81 88.0 -0.69 -0.07 16.3 79 6 3 2 7 3 0 0  U 662 A A 663 A U 827 A G 829 A G 830 A A 831 A G 832 A G 833 A U 834 A U 835 A U 837 A C 839 A G 846 A G 847 A C 848 A U 850 A G 851 A G 852 A U 854 A U 870 A LLL 2357 A 7 3.15 3.15 98.4 -0.60 -0.79 5.5 95 1 1 2 0 0 0 0  U 653 A G 654 A U 657 A C 658 A U 659 A C 660 A G 661 A U 662 A G 664 A A 665 A G 666 A G 667 A G 669 A G 670 A G 671 A U 672 A A 673 A A 712 A G 713 A G 714 A A 715 A G 733 A G 734 A C 735 A C 736 A C 737 A C 738 A U 740 A C 744 A G 745 A A 746 A G 748 A C 806 A C 826 A U 827 A G 851 A LLL 2358 A 8 1.16 2.82 100.9 -0.85 -0.28 15.5 80 10 3 2 7 2 0 0  U 662 A A 663 A G 664 A A 665 A G 666 A G 667 A G 668 A G 669 A G 670 A C 732 A G 733 A G 734 A C 735 A C 736 A C 737 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A G 809 A C 810 A C 811 A LLL 2358 A 9 1.21 2.56 100.6 -0.82 -0.30 15.6 81 8 3 3 7 2 0 0  U 662 A A 663 A G 664 A A 665 A G 666 A G 667 A G 669 A G 670 A G 671 A U 672 A A 673 A A 712 A G 713 A G 714 A A 715 A G 733 A G 734 A C 735 A C 736 A C 737 A C 806 A LLL 2358 A 10 2.65 2.65 106.9 -0.54 -0.78 5.2 72 1 0 0 0 0 0 0  G 530 A U 531 A A 573 A A 574 A G 575 A C 576 A G 577 A C 578 A G 761 A U 762 A G 763 A C 764 A G 809 A C 810 A C 811 A G 812 A U 813 A A 814 A A 815 A G 886 A G 887 A G 890 A C 897 A U 904 A U 905 A A 915 A U 916 A C 1051 A U 1052 A C 1054 A A 1055 A A 1394 A C 1397 A C 1402 A C 1403 A C 1404 A U 1490 A G 1491 A A 1492 A C 1510 A G 1511 A MG 2170 A 11 2.04 2.03 109.0 -0.37 -0.60 7.5 91 3 2 0 4 0 0 0  G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A A 223 A U 224 A G 257 A G 258 A G 259 A G 260 A U 261 A A 262 A U 268 A C 269 A A 321 A C 322 A G 324 A A 325 A G 326 A C 328 A A 452 A G 453 A G 454 A U 471 A U 472 A U 473 A G 474 A C 475 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A MG 2231 A 12 1.51 1.51 110.1 -0.61 -0.75 6.4 87 2 0 0 0 0 0 0  G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A A 223 A U 224 A G 257 A G 258 A G 259 A G 260 A U 261 A A 262 A U 268 A C 269 A A 321 A C 322 A G 324 A A 325 A G 326 A C 328 A A 382 A G 455 A U 458 A A 459 A A 460 A A 461 A G 462 A U 463 A U 464 A U 467 A A 468 A C 469 A C 470 A U 471 A U 472 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A MG 2231 A 13 1.99 1.99 114.1 -0.19 -0.69 3.2 103 0 0 0 1 0 0 0  A 53 A C 54 A A 55 A U 56 A G 57 A C 58 A A 59 A G 61 A U 62 A A 65 A G 97 A A 98 A C 99 A G 100 A A 101 A G 201 A G 202 A U 340 A C 341 A A 349 A G 350 A A 382 A A 383 A G 384 A C 385 A C 386 A A 456 A G 457 A U 458 A A 459 A A 460 A A 461 A G 462 A U 463 A U 464 A A 466 A U 467 A A 468 A C 469 A C 470 A 14 2.17 2.17 114.5 -0.85 -0.37 14.8 84 9 1 4 3 2 0 0  C 528 A G 530 A U 531 A G 861 A C 1051 A U 1052 A C 1054 A A 1055 A U 1070 A C 1071 A G 1072 A U 1075 A U 1076 A G 1077 A G 1079 A A 1081 A A 1082 A C 1192 A G 1193 A U 1194 A A 1196 A C 1397 A MG 2007 A 15 1.36 1.54 117.4 -1.45 -0.42 21.8 84 7 4 3 6 1 1 0  A 673 A G 674 A A 675 A U 709 A G 710 A G 711 A A 712 A 16 2.75 3.02 131.5 -1.06 -0.54 12.7 79 9 3 5 6 3 2 0  A 7 A G 237 A A 238 A G 299 A A 300 A G 301 A U 565 A G 566 A G 581 A C 582 A A 583 A G 584 A A 596 A G 597 A U 632 A G 633 A C 634 A A 635 A G 646 A C 647 A U 762 A A 860 A G 861 A C 862 A U 875 A C 876 A 17 3.02 3.02 144.0 -0.70 -0.74 8.0 79 4 0 0 1 0 0 0  G 530 A U 531 A G 727 A A 729 A G 818 A U 822 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A C 853 A U 854 A U 855 A C 856 A C 857 A C 866 A G 867 A U 870 A U 871 A G 886 A G 887 A A 915 A U 916 A G 917 A A 918 A A 919 A C 1051 A U 1052 A C 1054 A A 1055 A G 1392 A U 1393 A A 1394 A C 1397 A C 1402 A C 1403 A C 1404 A U 1490 A G 1491 A A 1492 A C 1510 A U 1528 A G 1529 A G 1530 A MG 2170 A 18 2.78 3.06 151.5 -1.22 -0.69 14.2 82 8 5 4 3 0 1 0  G 237 A A 238 A G 292 A G 293 A U 294 A C 295 A U 296 A G 297 A A 300 A G 301 A A 448 A G 449 A G 450 A A 452 A G 581 A C 582 A A 583 A G 584 A A 596 A G 597 A C 611 A C 612 A C 613 A G 615 A G 616 A G 617 A A 621 A A 622 A C 623 A C 624 A U 625 A A 630 A U 632 A G 633 A C 634 A A 635 A G 646 A C 647 A U 762 A 19 3.08 3.38 155.5 -1.12 -0.67 11.4 82 5 5 7 3 3 1 0  U 5 A G 6 A A 7 A C 295 A U 296 A G 299 A A 300 A A 448 A G 449 A G 450 A A 452 A U 565 A G 566 A C 611 A C 612 A C 613 A G 615 A G 616 A G 617 A A 621 A A 622 A C 623 A C 624 A U 625 A A 630 A U 632 A A 860 A G 861 A C 862 A U 875 A C 876 A 20 3.37 3.44 158.1 -0.65 -0.63 6.2 80 4 1 4 4 3 3 0  U 5 A A 7 A A 120 A U 121 A G 122 A G 237 A A 238 A U 239 A G 241 A U 252 A A 253 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A C 277 A G 278 A G 281 A A 282 A U 283 A G 292 A G 293 A U 294 A G 299 A A 300 A G 301 A G 302 A A 303 A U 304 A A 320 A A 321 A U 565 A G 566 A C 611 A A 630 A U 632 A A 860 A G 861 A C 862 A U 875 A C 876 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A 21 2.97 3.08 162.6 -0.74 -0.72 8.0 79 4 0 0 1 1 0 0  G 530 A U 531 A G 670 A G 671 A U 672 A A 673 A A 712 A G 713 A G 714 A A 715 A A 716 A U 717 A G 727 A G 731 A C 732 A G 733 A C 806 A G 818 A U 855 A C 856 A C 857 A C 866 A G 867 A G 886 A G 887 A A 915 A U 916 A G 917 A A 918 A A 919 A C 1051 A U 1052 A C 1054 A A 1055 A G 1392 A U 1393 A A 1394 A C 1397 A C 1402 A C 1403 A C 1404 A U 1490 A G 1491 A A 1492 A C 1510 A G 1525 A G 1526 A U 1527 A U 1528 A G 1529 A G 1530 A MG 2170 A LLL 2358 A 22 2.84 2.84 166.1 -0.60 -0.67 5.3 77 4 0 3 1 2 3 0  U 5 A A 7 A A 120 A U 121 A G 122 A G 237 A A 238 A U 239 A G 241 A U 252 A A 253 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A C 277 A G 278 A G 281 A A 282 A U 283 A G 292 A G 293 A U 294 A G 299 A A 300 A G 301 A G 302 A A 303 A U 304 A A 320 A A 321 A U 565 A G 566 A G 567 A G 568 A C 569 A C 611 A A 630 A U 632 A G 821 A U 822 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A U 870 A U 871 A A 872 A A 873 A G 874 A U 875 A C 876 A G 877 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A 23 2.82 2.82 168.2 -1.05 -0.72 10.5 80 5 4 5 0 2 1 0  U 5 A G 6 A A 7 A C 295 A U 296 A G 299 A A 300 A A 448 A G 449 A G 450 A A 452 A U 565 A G 566 A G 567 A G 568 A C 569 A C 611 A C 612 A C 613 A G 615 A G 616 A G 617 A A 621 A A 622 A C 623 A C 624 A U 625 A A 630 A U 632 A G 821 A U 822 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A U 870 A U 871 A A 872 A A 873 A G 874 A U 875 A C 876 A G 877 A 24 3.05 3.05 173.5 -0.24 -0.67 4.6 78 2 1 0 3 0 0 0  A 50 A C 52 A A 116 A G 117 A U 118 A A 119 A A 120 A U 121 A G 122 A G 241 A G 242 A U 252 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A C 286 A U 287 A G 318 A G 319 A A 320 A A 321 A G 530 A U 531 A U 562 A A 573 A A 574 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A A 907 A A 908 A A 909 A A 915 A U 916 A C 1051 A U 1052 A C 1054 A A 1055 A A 1394 A C 1397 A C 1402 A C 1403 A C 1404 A G 1423 A U 1424 A U 1425 A G 1426 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A C 1479 A U 1490 A G 1491 A A 1492 A C 1510 A MG 2170 A 25 1.48 1.48 188.1 -0.34 -0.69 5.3 77 3 1 0 3 0 0 0  A 50 A C 52 A A 53 A C 54 A A 55 A A 116 A G 117 A G 241 A G 242 A A 243 A U 244 A C 286 A U 287 A C 316 A U 317 A U 340 A C 341 A G 350 A G 351 A C 352 A A 353 A G 668 A G 669 A G 670 A G 671 A U 672 A A 673 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A G 760 A G 761 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A C 806 A A 807 A C 810 A C 811 A G 812 A G 895 A C 896 A C 897 A G 903 A U 904 A U 905 A A 906 A A 907 A A 908 A A 909 A G 1423 A U 1424 A C 1479 A LLL 2358 A 26 1.58 1.58 186.9 -0.53 -0.64 5.7 80 2 2 4 6 3 1 0  U 5 A A 7 A A 50 A C 52 A A 53 A C 54 A A 55 A A 116 A G 117 A A 119 A U 239 A G 240 A G 241 A U 287 A A 288 A C 290 A U 291 A G 292 A G 293 A U 294 A G 299 A A 300 A G 301 A G 302 A A 303 A U 304 A G 305 A C 316 A U 317 A U 340 A C 341 A G 350 A G 351 A C 352 A A 353 A U 565 A G 566 A C 611 A A 630 A U 632 A A 860 A G 861 A C 862 A U 875 A C 876 A G 1423 A U 1424 A 27 1.80 1.79 196.9 -1.43 -0.56 18.6 83 17 9 8 7 3 1 0  G 861 A A 996 A G 1058 A C 1059 A U 1060 A U 1070 A C 1071 A G 1072 A U 1075 A U 1076 A G 1077 A G 1079 A A 1081 A A 1082 A C 1192 A G 1193 A U 1194 A C 1203 A A 1204 A U 1205 A MG 2007 A 28 1.52 1.52 199.6 -0.41 -0.66 4.3 77 2 0 3 3 2 1 0  U 5 A A 7 A A 50 A C 52 A A 53 A C 54 A A 55 A A 116 A G 117 A A 119 A U 239 A G 240 A G 241 A U 287 A A 288 A C 290 A U 291 A G 292 A G 293 A U 294 A G 299 A A 300 A G 301 A G 302 A A 303 A U 304 A G 305 A C 316 A U 317 A U 340 A C 341 A G 350 A G 351 A C 352 A A 353 A U 565 A G 566 A G 567 A G 568 A C 569 A C 611 A A 630 A U 632 A G 821 A U 822 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A U 870 A U 871 A A 872 A A 873 A G 874 A U 875 A C 876 A G 877 A G 1423 A U 1424 A 29 1.81 1.96 223.1 -1.04 -0.61 11.7 79 14 2 3 2 2 3 0  A 673 A G 674 A A 675 A A 676 A U 677 A U 678 A G 691 A U 692 A G 693 A A 706 A U 707 A C 708 A U 709 A G 710 A G 711 A A 712 A G 713 A C 924 A G 925 A G 926 A G 928 A C 930 A C 931 A G 933 A A 935 A G 966 A C 967 A A 968 A C 970 A U 1062 A C 1063 A U 1065 A U 1232 A G 1233 A C 1234 A U 1235 A C 1243 A C 1267 A G 1305 A A 1306 A U 1307 A U 1308 A G 1310 A A 1311 A G 1312 A C 1325 A U 1326 A C 1327 A C 1328 A A 1329 A G 1353 A U 1354 A U 1364 A G 1365 A C 1366 A C 1382 A C 1383 A C 1384 A G 1385 A G 1386 A C 1400 A A 1503 A MG 2192 A 30 1.78 1.93 232.7 -0.98 -0.71 10.8 78 13 2 0 1 1 1 0  G 727 A A 729 A G 818 A U 822 A C 823 A G 824 A A 825 A C 826 A U 827 A G 851 A G 852 A C 853 A U 854 A U 855 A C 856 A C 857 A C 866 A G 867 A U 870 A U 871 A A 919 A U 920 A U 921 A G 922 A A 923 A C 924 A G 925 A G 933 A A 935 A G 966 A C 967 A A 968 A C 970 A U 1062 A C 1063 A U 1065 A U 1232 A G 1233 A C 1234 A U 1235 A C 1243 A C 1267 A G 1305 A A 1306 A U 1307 A U 1308 A G 1310 A A 1311 A G 1312 A C 1325 A U 1326 A C 1327 A C 1328 A A 1329 A G 1353 A U 1354 A U 1364 A G 1365 A C 1366 A G 1385 A G 1386 A G 1387 A C 1388 A C 1389 A U 1390 A U 1391 A G 1392 A U 1393 A C 1400 A U 1528 A G 1529 A 31 1.14 1.13 31.6 1.51 0.37 6.5 85 1 2 0 9 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.