PDBsum entry 2ppf Go to PDB code:  Tunnel analysis for: 2ppf calculated with MOLE 2.0 PDB id 2ppf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.37 1.52 45.6 -2.12 -0.69 22.4 86 8 4 1 2 0 0 0  TRS 1501 B 2 1.54 1.54 45.7 -2.07 -0.68 21.9 86 8 4 1 2 0 0 0  TRS 1501 B 3 1.27 1.56 23.7 -0.51 -0.11 9.1 82 2 1 1 4 2 1 0   4 1.13 1.21 25.9 -0.60 -0.37 9.9 79 2 1 0 3 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.