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PDBsum entry 2nya

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2nya calculated with MOLE 2.0 PDB id
2nya
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.83 2.39 44.6 -1.72 -0.20 19.2 81 6 2 7 4 2 0 0  
2 1.45 1.85 45.8 -1.49 -0.26 13.8 81 3 2 5 5 2 0 0  
3 2.46 2.46 74.6 -1.41 -0.45 21.6 83 10 10 5 8 2 0 0  
4 2.42 2.42 75.2 -1.49 -0.45 22.9 82 10 9 4 9 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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