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PDBsum entry 2gwc

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2gwc calculated with MOLE 2.0 PDB id
2gwc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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4 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.12 1.24 49.5 -0.02 0.01 10.1 70 5 3 1 6 6 0 0  MSE 257 F MSE 384 F MSE 386 F
2 1.14 1.25 55.8 -0.66 -0.17 15.6 77 6 6 6 7 7 0 0  BSC 2 F MSE 257 F MSE 384 F MSE 386 F
3 1.43 1.43 20.5 0.49 -0.03 5.2 66 1 1 2 1 2 1 2  MSE 329 F MSE 344 F
4 1.48 1.55 21.7 0.48 -0.07 4.1 65 1 1 2 1 3 1 2  MSE 329 F MSE 344 F
5 1.42 1.42 20.0 0.19 -0.04 7.7 67 1 1 2 1 3 1 1  MSE 329 A MSE 344 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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