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PDBsum entry 2fdc
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Tunnel analysis for: 2fdc calculated with  MOLE 2.0
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PDB id
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2fdc
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.33 |
1.52 |
18.6 |
-2.09 |
-0.51 |
24.3 |
69 |
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2 |
2 |
0 |
0 |
2 |
0 |
0 |
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DC 15 D DC 16 D DG 17 D DC 18 D
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2 |
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1.35 |
1.39 |
23.4 |
-2.64 |
-0.41 |
29.1 |
76 |
5 |
3 |
2 |
0 |
3 |
0 |
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DG 17 D DC 18 D DA 19 D
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3 |
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1.32 |
1.51 |
35.7 |
-0.75 |
-0.46 |
10.2 |
80 |
3 |
3 |
3 |
1 |
4 |
0 |
0 |
DG 17 D DC 18 D
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4 |
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1.66 |
1.66 |
16.6 |
-1.32 |
-0.22 |
15.5 |
78 |
3 |
1 |
1 |
1 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program