PDBsum entry 2f8s Go to PDB code:  Tunnel analysis for: 2f8s calculated with MOLE 2.0 PDB id 2f8s Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 9 tunnels, coloured by tunnel radius 9 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.20 1.18 44.1 -1.86 -0.56 25.6 80 9 3 2 3 1 0 0   2 1.20 1.18 46.5 -1.96 -0.57 26.1 83 7 4 3 1 2 0 0   3 1.23 1.20 46.6 -2.21 -0.64 27.3 82 8 6 4 3 1 1 0   4 1.17 1.18 70.2 -2.35 -0.58 28.7 80 11 8 3 2 2 0 0   5 1.27 1.35 70.7 -2.54 -0.60 29.0 83 13 8 7 3 1 0 0   6 1.19 1.25 70.9 -2.14 -0.64 25.7 81 11 6 4 2 2 0 0   7 1.18 1.22 73.8 -1.92 -0.48 24.5 79 11 6 4 4 3 0 0  U 22 C 8 1.28 1.28 82.5 -2.47 -0.59 28.8 81 14 10 6 4 1 0 0   9 1.22 1.40 91.6 -1.38 -0.26 23.4 81 13 7 3 9 4 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.