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PDBsum entry 2ddb
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Pore analysis for: 2ddb calculated with  MOLE 2.0
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PDB id
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2ddb
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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5 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.47 |
2.40 |
35.8 |
-1.38 |
-0.22 |
18.5 |
76 |
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5 |
1 |
2 |
2 |
2 |
1 |
0 |
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2 |
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1.34 |
1.71 |
36.2 |
-1.86 |
-0.33 |
21.9 |
83 |
8 |
0 |
4 |
2 |
0 |
0 |
1 |
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3 |
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2.05 |
2.34 |
57.5 |
-1.08 |
0.11 |
21.1 |
88 |
6 |
0 |
4 |
4 |
0 |
2 |
0 |
FMT 305 A
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4 |
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2.73 |
2.85 |
58.1 |
-0.96 |
-0.40 |
13.3 |
88 |
8 |
1 |
5 |
4 |
2 |
1 |
0 |
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5 |
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1.98 |
2.83 |
81.7 |
-1.26 |
-0.28 |
18.1 |
87 |
7 |
1 |
5 |
2 |
1 |
1 |
0 |
FMT 323 C
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6 |
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1.38 |
1.55 |
92.4 |
-0.01 |
0.01 |
7.8 |
86 |
6 |
0 |
6 |
8 |
6 |
1 |
0 |
FMT 310 C
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7 |
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1.40 |
1.57 |
126.5 |
-0.35 |
-0.05 |
12.9 |
81 |
11 |
2 |
6 |
7 |
7 |
2 |
0 |
FMT 310 C FMT 322 D GOL 327 D
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8 |
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1.52 |
1.76 |
149.0 |
-1.12 |
-0.24 |
17.9 |
83 |
15 |
3 |
8 |
4 |
4 |
2 |
0 |
FMT 322 D GOL 327 D
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9 |
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1.85 |
2.17 |
169.5 |
-1.50 |
-0.24 |
20.0 |
79 |
14 |
3 |
5 |
2 |
3 |
5 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program