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PDBsum entry 2d4y
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Pore analysis for: 2d4y calculated with  MOLE 2.0
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PDB id
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2d4y
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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10 pores,
coloured by radius |
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10 pores,
coloured by radius
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10 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.85 |
2.73 |
25.6 |
-1.71 |
-0.69 |
14.9 |
96 |
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1 |
2 |
7 |
1 |
1 |
0 |
0 |
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2 |
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3.40 |
4.69 |
34.4 |
-2.94 |
-0.78 |
17.8 |
97 |
4 |
1 |
10 |
0 |
0 |
0 |
0 |
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3 |
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2.31 |
2.43 |
36.1 |
-2.21 |
-0.53 |
14.3 |
89 |
3 |
1 |
7 |
2 |
1 |
0 |
0 |
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4 |
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1.51 |
3.28 |
63.0 |
-2.45 |
-0.56 |
25.6 |
89 |
8 |
6 |
8 |
3 |
0 |
0 |
0 |
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5 |
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1.55 |
3.28 |
68.3 |
-2.09 |
-0.49 |
21.9 |
86 |
8 |
6 |
7 |
5 |
1 |
0 |
0 |
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6 |
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1.53 |
3.27 |
68.8 |
-2.54 |
-0.64 |
24.4 |
91 |
9 |
6 |
12 |
3 |
0 |
0 |
0 |
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7 |
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1.99 |
2.45 |
74.9 |
-1.79 |
-0.57 |
16.4 |
86 |
3 |
5 |
9 |
4 |
2 |
0 |
0 |
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8 |
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2.01 |
2.45 |
81.9 |
-1.55 |
-0.51 |
14.2 |
85 |
3 |
5 |
8 |
6 |
3 |
0 |
0 |
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9 |
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1.98 |
2.50 |
85.2 |
-2.10 |
-0.66 |
17.2 |
90 |
4 |
5 |
13 |
4 |
2 |
0 |
0 |
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10 |
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1.55 |
3.26 |
98.0 |
-2.07 |
-0.58 |
22.4 |
86 |
7 |
9 |
10 |
6 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program