PDBsum entry 2d3t Go to PDB code:  Tunnel analysis for: 2d3t calculated with MOLE 2.0 PDB id 2d3t Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.19 1.45 32.1 -0.51 0.10 18.7 79 5 2 2 9 1 0 1   2 1.22 1.47 43.0 -0.75 -0.04 18.6 76 6 2 2 9 2 0 1   3 1.20 2.23 31.4 0.73 0.29 10.6 71 3 1 0 5 4 0 0   4 1.25 2.14 36.1 0.15 0.21 16.1 75 2 3 0 5 4 0 0   5 1.21 2.20 37.1 2.11 0.78 1.2 72 0 0 1 9 5 1 0   6 1.21 2.19 38.3 1.25 0.49 4.2 82 1 2 3 9 5 0 0  NAD 1002 B 7 1.24 2.15 43.0 2.03 0.81 1.1 75 0 0 3 10 6 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.