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PDBsum entry 2d13
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Tunnel analysis for: 2d13 calculated with  MOLE 2.0
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PDB id
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2d13
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.12 |
1.52 |
26.2 |
-0.23 |
-0.09 |
20.4 |
79 |
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2 |
3 |
0 |
5 |
1 |
0 |
0 |
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2 |
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1.12 |
1.55 |
42.5 |
-1.06 |
-0.08 |
27.7 |
79 |
7 |
4 |
0 |
7 |
2 |
0 |
0 |
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3 |
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1.10 |
1.53 |
43.9 |
-0.20 |
-0.02 |
14.9 |
76 |
2 |
2 |
1 |
7 |
3 |
0 |
0 |
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4 |
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1.13 |
1.56 |
56.6 |
-0.37 |
-0.14 |
20.5 |
84 |
6 |
4 |
2 |
8 |
1 |
0 |
0 |
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5 |
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1.12 |
1.58 |
58.8 |
-0.61 |
-0.07 |
21.9 |
77 |
7 |
4 |
0 |
8 |
3 |
0 |
0 |
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6 |
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1.13 |
1.61 |
74.8 |
-1.16 |
-0.39 |
21.0 |
81 |
6 |
7 |
3 |
10 |
2 |
0 |
0 |
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7 |
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1.20 |
1.55 |
79.1 |
-0.75 |
-0.26 |
20.5 |
86 |
7 |
7 |
4 |
12 |
1 |
0 |
0 |
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8 |
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1.18 |
2.28 |
91.3 |
-0.99 |
-0.35 |
19.6 |
85 |
8 |
7 |
5 |
11 |
1 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program