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PDBsum entry 2c20

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 2c20 calculated with MOLE 2.0 PDB id
2c20
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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3 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 2.45 29.4 -0.46 0.02 16.5 72 2 2 1 8 4 1 0  
2 1.23 3.13 30.8 0.27 0.18 12.3 76 2 2 1 9 4 0 0  
3 1.22 3.06 33.8 0.23 0.15 12.3 78 1 3 1 9 3 0 0  
4 1.19 1.90 87.4 -0.47 -0.03 13.9 83 8 3 6 14 6 0 1  NAD 401 C
5 1.20 2.40 88.4 -0.30 0.02 13.4 83 8 3 6 16 6 0 1  NAD 401 C
6 1.27 1.41 19.9 1.87 0.80 7.0 73 2 0 1 8 2 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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