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PDBsum entry 2b9o
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Tunnel analysis for: 2b9o calculated with  MOLE 2.0
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PDB id
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2b9o
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.42 |
1.42 |
19.4 |
-0.40 |
-0.80 |
3.4 |
0 |
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0 |
0 |
0 |
0 |
0 |
0 |
0 |
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A 14 W G 15 W U 16 W U 17 W G 18 W G 19 W G 20 W
A 21 W G 22 W C 48 W A 58 W U 59 W C 60 W
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2 |
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1.34 |
1.34 |
18.1 |
-1.25 |
-0.74 |
10.0 |
88 |
1 |
0 |
1 |
0 |
0 |
0 |
0 |
A 1238 A G 1241 A C 1242 A C 1296 A C 1297 A A
1299 A U 1301 A U 1302 A
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3 |
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1.23 |
1.36 |
17.1 |
0.19 |
-0.16 |
7.9 |
74 |
1 |
1 |
0 |
4 |
0 |
1 |
0 |
U 190 A i:L U 192 A
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4 |
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1.24 |
1.35 |
18.1 |
0.87 |
0.03 |
4.3 |
70 |
0 |
1 |
0 |
5 |
0 |
1 |
0 |
U 190 A i:L
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program