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PDBsum entry 2ar0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 2ar0 calculated with MOLE 2.0 PDB id
2ar0
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.51 1.60 37.6 -0.43 -0.11 11.5 65 2 1 1 5 2 2 0  MSE 41 A MSE 492 A
2 1.50 1.60 44.4 -0.59 -0.18 15.4 72 5 3 1 5 3 1 0  MSE 41 A MSE 492 A
3 1.60 1.66 99.3 -1.06 -0.06 12.4 74 5 2 6 7 4 1 0  MSE 506 A UNX 1003 A UNX 1005 A UNX 1006 A UNX
1007 A UNX 1008 A UNX 1009 A
4 1.51 1.60 110.4 -0.71 -0.13 11.2 74 5 2 5 10 5 0 0  MSE 41 A MSE 492 A MSE 506 A UNX 1003 A UNX 1005
A UNX 1006 A UNX 1007 A UNX 1008 A UNX 1009 A
5 1.51 1.60 37.8 -0.43 -0.11 11.5 65 2 1 1 5 2 2 0  MSE 41 B MSE 492 B
6 1.50 1.60 44.2 -0.43 -0.14 13.8 72 4 3 1 5 3 1 0  MSE 41 B MSE 492 B
7 1.51 1.64 47.9 -0.59 -0.12 14.6 73 1 6 2 5 2 0 0  MSE 41 B MSE 492 B
8 2.37 3.98 27.2 -2.28 -0.18 33.6 81 6 3 1 1 2 1 0  
9 2.37 4.24 33.9 -2.42 -0.25 32.2 83 6 4 2 1 2 1 0  
10 1.17 1.30 35.0 -2.20 -0.50 18.2 81 5 3 5 1 0 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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