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PDBsum entry 2a0f

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 2a0f calculated with MOLE 2.0 PDB id
2a0f
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.32 1.35 31.6 1.25 0.15 2.4 72 1 0 2 9 0 1 0  
2 1.23 1.75 37.2 1.35 0.46 7.6 80 1 2 3 6 5 0 0  
3 1.56 2.42 77.1 -0.47 -0.04 16.6 79 4 3 3 6 2 0 0  
4 1.19 1.42 79.7 -0.63 0.00 12.8 82 5 3 6 6 4 1 0  
5 1.24 2.37 86.1 -0.51 -0.10 19.4 79 9 5 4 13 2 1 0  
6 1.39 3.10 139.8 -0.41 -0.08 13.1 81 8 5 8 11 3 2 0  
7 1.41 3.10 149.3 -0.96 -0.28 17.9 83 8 9 7 8 2 2 0  
8 1.23 2.26 253.1 -0.57 -0.11 18.2 80 16 8 8 20 4 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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