spacer
spacer

PDBsum entry 1yi2

Go to PDB code: 
Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 1yi2 calculated with MOLE 2.0 PDB id
1yi2
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
33 pores, coloured by radius 33 pores, coloured by radius 33 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.94 1.94 54.2 -1.02 -0.81 12.0 76 3 4 0 0 0 1 0  G 1391 0 A 1392 0 G 1727 0 G 1728 0 A 1729 0 G
1730 0 C 2833 0 G 2834 0 C 2835 0 G 2836 0 A 2852
0 U 2853 0 A 2854 0 G 2855 0 C 2897 0 G 2898 0 A
2899 0 G 2900 0 C 2901 0
2 3.03 4.05 77.6 -1.35 -0.63 17.2 82 5 3 1 2 0 0 0  C 58 0 A 495 0 G 496 0 A 497 0 A 498 0 G 499 0 A
1390 0 G 1391 0 A 1392 0 A 1424 0 A 1427 0 A 1434
0 G 1441 0 A 1442 0 G 1443 0
3 2.29 2.32 89.6 -1.17 -0.80 14.7 90 2 5 0 1 0 0 0  U 555 0 C 563 0 G 564 0 A 565 0 U 595 0 C 596 0 A
597 0 C 598 0 G 1265 0 U 1266 0 C 1267 0 C 1268 0
G 1269 0 A 1280 0 C 1281 0 U 1282 0 G 1283 0 G
1284 0 U 1285 0
4 2.15 2.16 121.0 -0.94 -0.78 10.5 85 4 4 1 0 0 1 0  C 1228 0 C 1229 0 A 1231 0 G 1235 0 G 1391 0 A
1392 0 G 1727 0 G 1728 0 A 1729 0 A 2083 0 C 2084
0 U 2550 0 C 2551 0 C 2552 0 G 2574 0 C 2575 0 A
2576 0 A 2577 0 G 2578 0 U 2655 0 G 2657 0 G 2658
0 U 2659 0 U 2669 0 G 2670 0 A 2677 0 A 2678 0 G
2679 0 A 2776 0 G 2777 0 G 2809 0 A 2812 0 A 2813
0 G 2829 0 U 2830 0 C 2831 0 C 2832 0 C 2833 0 C
2835 0 G 2842 0 C 2844 0 G 2845 0 C 2846 0
5 1.95 2.34 122.2 -0.83 -0.70 10.2 80 6 3 0 2 1 0 0  G 1119 0 U 1120 0 G 1121 0 G 1131 0 A 1132 0 A
1133 0 G 1223 0 G 1224 0 C 1225 0 G 1226 0 C 1227
0 C 1228 0 C 1229 0 A 1230 0 A 1231 0 G 2574 0 C
2575 0 A 2776 0 G 2777 0 G 78 9 U 79 9 A 80 9 G
90 9 C 91 9 G 92 9 C 95 9 C 96 9 U 97 9 C 98 9 U
99 9 G 100 9
6 1.85 1.85 125.6 -1.41 -0.75 17.5 76 6 5 1 1 0 0 0  C 18 0 U 19 0 G 20 0 U 488 0 A 495 0 G 496 0 A
498 0 G 499 0 G 500 0 G 501 0 A 502 0 G 503 0 A
509 0 U 510 0 G 512 0 A 513 0 U 548 0 A 549 0 C
550 0 A 551 0 A 552 0 G 553 0 G 554 0 U 555 0 A
597 0 C 598 0 A 603 0 G 604 0 G 1322 0 G 1323 0 G
1337 0 U 1338 0 A 1390 0 G 1391 0 A 1392 0 A 1427
0 A 1434 0
7 1.93 1.93 132.2 -0.45 -0.80 4.0 80 1 1 0 0 0 0 0  A 542 0 G 543 0 U 555 0 C 556 0 C 557 0 C 558 0 C
594 0 U 595 0 C 596 0 A 597 0 C 598 0 G 615 0 U
616 0 C 617 0 G 1076 0 G 1077 0 A 1092 0 G 1093 0
G 1100 0 U 1101 0 C 1105 0 A 1106 0 G 1119 0 U
1120 0 G 1121 0 U 1122 0 A 1123 0 A 1124 0 G 1131
0 G 1226 0 C 1227 0 C 1228 0 C 1229 0 A 1230 0 A
1231 0 G 1239 0 U 1249 0 C 1250 0 G 1258 0 A 1259
0 G 2574 0 C 2575 0 A 2776 0 G 2777 0 G 88 9 C 89
9 G 90 9 C 91 9
8 1.80 1.80 137.2 -0.72 -0.71 10.0 79 3 3 0 3 0 0 0  C 18 0 U 19 0 G 20 0 C 58 0 U 488 0 A 497 0 G 499
0 G 500 0 G 501 0 A 502 0 G 503 0 A 509 0 U 510 0
A 513 0 U 548 0 A 549 0 C 550 0 A 551 0 A 552 0 G
553 0 G 554 0 U 555 0 A 597 0 C 598 0 A 603 0 G
604 0 G 1322 0 G 1323 0 G 1337 0 U 1338 0 A 1424
0 G 1441 0 A 1442 0 G 1443 0
9 1.43 1.42 148.5 -0.99 -0.74 11.1 87 5 3 0 1 0 0 0  U 909 0 C 910 0 G 911 0 C 930 0 C 931 0 C 933 0 C
934 0 A 943 0 G 944 0 U 945 0 C 946 0 U 947 0 C
1015 0 U 1017 0 A 1018 0 C 1019 0 U 1030 0 G 1031
0 A 1032 0 C 1033 0 G 1269 0 U 1270 0 A 1271 0 C
1272 0 U 1279 0 A 1280 0 C 1281 0 C 1289 0 U 1298
0 G 1299 0 C 2393 0 G 100 9 G 101 9
10 2.94 2.94 191.0 -0.76 -0.79 7.8 88 3 4 0 0 0 0 0  U 909 0 C 910 0 G 911 0 A 913 0 A 914 0 C 915 0 A
929 0 C 930 0 C 931 0 C 933 0 C 934 0 A 943 0 U
1030 0 G 1031 0 A 1032 0 C 1033 0 G 1046 0 U 1047
0 G 1048 0 C 1049 0 C 1051 0 A 1058 0 G 1059 0 C
1060 0 U 1062 0 G 1063 0 U 1064 0 G 1065 0 U 1066
0 G 1119 0 U 1120 0 C 1126 0 U 1128 0 C 1129 0 U
1130 0 C 1228 0 C 1229 0 A 1231 0 A 1232 0 A 1236
0 U 1237 0 C 1238 0 G 1269 0 U 1270 0 A 1271 0 C
1272 0 U 1279 0 A 1280 0 C 1281 0 C 1289 0 U 1298
0 G 1299 0 U 2492 0 C 2493 0 G 2524 0 G 2525 0 G
2574 0 C 2575 0 A 2776 0 G 2777 0 MG 8025 0 C 91
9 G 92 9 A 93 9
11 1.47 4.90 197.2 -0.93 -0.70 11.6 81 7 3 0 2 1 0 0  A 542 0 G 543 0 U 555 0 C 556 0 C 557 0 C 558 0 G
568 0 A 569 0 C 583 0 C 594 0 U 595 0 C 596 0 A
597 0 C 598 0 G 615 0 A 1092 0 G 1093 0 G 1094 0
U 1095 0 G 1223 0 G 1224 0 C 1251 0 A 1252 0 C
1253 0 C 1254 0 A 1255 0 C 1256 0 C 1257 0 G 1258
0 A 1259 0 G 78 9 U 79 9 A 80 9 G 88 9 C 95 9 C
96 9 U 97 9 C 98 9 U 99 9 G 100 9
12 1.65 1.73 202.0 -0.90 -0.72 8.4 91 8 0 4 1 0 0 0  U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A 597 0 C
598 0 G 607 0 A 608 0 U 609 0 A 635 0 G 636 0 C
637 0 C 638 0 A 639 0 G 640 0 U 845 0 C 1320 0 A
1321 0 G 1322 0 G 1323 0 G 1324 0 G 1325 0 C 1326
0 G 1331 0 C 1332 0 U 1333 0 A 1355 0 A 1356 0 A
1357 0 C 1360 0 C 1361 0 U 1362 0 G 1363 0 G 1364
0 A 1895 0 G 1896 0 G 1944 0 G 1945 0 U 1967 0 A
1968 0 C 2056 0 A 2099 0 A 2100 0 A 2103 0 A 2474
0 G 2540 0 G 2616 0 G 2618 0 UR3 2619 0 U 2620 0
PSU 2621 0 A 2622 0 A 2624 0 C 2625 0 C 2626 0 G
2627 0 U 2628 0 C 2629 0 G 2630 0 U 2631 0 G 2632
0 A 2635 0 C 2636 0 U 2640 0 G 2642 0 G 2643 0 C
2644 0 U 2645 0 G 2646 0 MG 8023 0 MG 8063 0 ERY
9000 0
13 1.44 1.44 205.5 -0.91 -0.71 8.8 83 4 3 2 1 0 2 0  G 740 0 C 741 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 C 933 0 C 934 0 G 935 0 C 936 0 G 1031 0 A
1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037
0 G 1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A
1280 0 C 1281 0 U 1298 0 G 1299 0 G 1896 0 U 1897
0 G 1898 0 U 2117 0 C 2119 0 U 2120 0 G 2121 0 C
2268 0 C 2269 0 G 2270 0 A 2395 0 C 2396 0 G 2397
0 A 2398 0 G 2399 0 A 2429 0 A 2430 0 C 2431 0 C
2432 0 A 2455 0 A 2456 0 U 2457 0 U 2458 0 G 2459
0 A 2460 0 U 2631 0
14 2.47 2.47 207.2 -1.06 -0.79 12.1 84 6 10 2 0 1 0 0  U 35 0 C 36 0 A 37 0 G 47 0 A 48 0 A 49 0 G 50 0
G 51 0 U 63 0 G 64 0 C 65 0 G 66 0 U 108 0 U 109
0 C 110 0 C 111 0 A 114 0 G 116 0 C 124 0 U 125 0
A 128 0 A 129 0 A 151 0 G 209 0 C 440 0 A 441 0 A
442 0 C 443 0 A 459 0 G 464 0 U 645 0 G 646 0 U
647 0 G 648 0 U 649 0 A 665 0 A 666 0 A 750 0 U
751 0 G 752 0 U 753 0 G 754 0 G 755 0 U 1279 0 A
1280 0 C 1281 0 G 1299 0 G 1300 0 U 1347 0 A 1348
0 G 1349 0 U 1350 0 G 1351 0 C 1353 0 U 1673 0 NA
8504 C
15 1.38 1.38 210.1 -0.67 -0.66 8.9 78 5 2 1 3 1 2 0  G 724 0 C 725 0 G 740 0 C 741 0 G 941 0 U 942 0 G
944 0 U 945 0 C 946 0 U 947 0 C 1015 0 U 1017 0 A
1018 0 C 1019 0 A 1020 0 C 1033 0 G 1034 0 G 1036
0 G 1896 0 U 1897 0 G 1898 0 U 2117 0 C 2119 0 U
2120 0 G 2121 0 C 2268 0 C 2269 0 G 2270 0 U 2387
0 C 2396 0 G 2397 0 A 2398 0 G 2399 0 A 2429 0 A
2430 0 C 2431 0 C 2432 0 A 2455 0 A 2456 0 U 2457
0 U 2458 0 G 2459 0 A 2460 0 U 2631 0 G 100 9 G
101 9
16 1.55 1.53 224.2 -0.71 -0.74 8.1 80 6 2 0 2 1 0 0  U 1120 0 G 1121 0 C 1129 0 U 1130 0 G 1131 0 A
1132 0 A 1133 0 G 1223 0 G 1224 0 C 1225 0 G 1226
0 C 1227 0 A 1230 0 A 1232 0 U 1237 0 C 1238 0 G
1945 0 C 1946 0 G 1947 0 G 1971 0 U 1972 0 U 2004
0 G 2005 0 U 2008 0 G 2009 0 U 2012 0 G 2068 0 A
2474 0 C 2487 0 A 2488 0 G 2489 0 A 2490 0 G 2491
0 U 2492 0 G 2524 0 G 2525 0 U 2527 0 U 2528 0 G
2529 0 C 2530 0 C 2542 0 OMG 2588 0 U 2589 0 C
2608 0 G 2618 0 UR3 2619 0 U 2620 0 A 2624 0 C
2625 0 C 2626 0 G 2627 0 U 2628 0 A 2635 0 C 2636
0 A 2637 0 G 2638 0 G 2639 0 U 2640 0 MG 8025 0 N
A 8571 0 G 78 9 U 79 9 A 80 9 G 90 9 C 91 9 G 92
9 C 95 9 C 96 9 U 97 9 C 98 9 U 99 9 G 100 9
17 1.21 1.21 228.8 -0.98 -0.79 10.9 87 8 8 3 0 0 0 0  A 37 0 G 38 0 G 39 0 G 209 0 A 234 0 C 235 0 A
236 0 G 237 0 C 238 0 C 239 0 C 240 0 A 241 0 A
242 0 A 243 0 C 244 0 C 245 0 G 246 0 G 264 0 U
265 0 G 266 0 G 267 0 U 268 0 G 269 0 C 276 0 U
286 0 C 287 0 A 288 0 C 295 0 G 296 0 C 356 0 A
360 0 C 361 0 C 433 0 U 434 0 U 645 0 G 646 0 U
647 0 G 648 0 U 649 0 A 665 0 A 666 0 C 667 0 C
668 0 G 669 0 A 671 0 U 673 0 A 674 0 A 750 0 U
751 0 G 752 0 U 753 0 G 754 0 G 755 0 U 1270 0 U
1279 0 A 1280 0 C 1281 0 G 1299 0 G 1300 0 U 1347
0 A 1348 0 G 1349 0 U 1350 0 G 1351 0 C 1353 0 NA
8504 C CL 8820 Y
18 1.51 1.51 240.6 -0.92 -0.72 8.8 85 6 2 3 1 0 2 0  G 740 0 C 741 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 C 933 0 C 934 0 G 935 0 C 936 0 G 1031 0 A
1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037
0 G 1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A
1280 0 C 1281 0 U 1298 0 G 1299 0 C 1856 0 A 1857
0 A 1858 0 A 1859 0 G 2121 0 C 2122 0 A 2123 0 G
2124 0 G 2125 0 C 2126 0 U 2127 0 C 2241 0 U 2242
0 G 2254 0 A 2255 0 G 2256 0 G 2257 0 A 2260 0 C
2261 0 C 2262 0 U 2265 0 A 2266 0 G 2267 0 C 2268
0 G 2270 0 A 2395 0 C 2396 0 G 2397 0 A 2398 0 G
2399 0 A 2429 0 A 2430 0 C 2431 0 C 2432 0 A 2455
0 A 2456 0 U 2457 0 U 2458 0 G 2459 0 A 2460 0
19 2.65 2.64 236.6 -1.25 -0.75 14.9 84 12 12 2 2 0 0 0  C 31 0 G 33 0 U 35 0 C 36 0 A 37 0 G 50 0 C 62 0
U 63 0 C 85 0 A 86 0 A 151 0 G 209 0 C 440 0 A
441 0 A 442 0 C 443 0 A 459 0 C 461 0 A 462 0 A
463 0 G 464 0 G 479 0 C 480 0 A 495 0 G 496 0 A
498 0 G 499 0 G 514 0 U 645 0 G 646 0 U 647 0 G
648 0 U 649 0 A 665 0 A 666 0 A 750 0 U 751 0 G
752 0 U 753 0 G 754 0 G 755 0 U 1279 0 A 1280 0 C
1281 0 G 1299 0 G 1300 0 U 1347 0 A 1348 0 G 1349
0 U 1350 0 G 1351 0 C 1353 0 A 1390 0 G 1391 0 A
1392 0 A 1427 0 A 1434 0 NA 8504 C CL 8820 Y
20 1.34 1.34 245.2 -0.77 -0.70 8.9 83 7 2 2 3 0 2 0  G 724 0 C 725 0 G 740 0 C 741 0 G 941 0 U 942 0 G
944 0 U 945 0 C 946 0 U 947 0 C 1015 0 U 1017 0 A
1018 0 C 1019 0 A 1020 0 C 1033 0 G 1034 0 G 1036
0 C 1856 0 A 1857 0 A 1858 0 A 1859 0 G 2121 0 C
2122 0 A 2123 0 G 2124 0 G 2125 0 C 2126 0 U 2127
0 C 2241 0 U 2242 0 G 2254 0 A 2255 0 G 2256 0 G
2257 0 A 2260 0 C 2261 0 C 2262 0 U 2265 0 A 2266
0 G 2267 0 C 2268 0 G 2270 0 U 2387 0 C 2396 0 G
2397 0 A 2398 0 G 2399 0 A 2429 0 A 2430 0 C 2431
0 C 2432 0 A 2455 0 A 2456 0 U 2457 0 U 2458 0 G
2459 0 A 2460 0 G 100 9 G 101 9
21 1.38 1.37 245.5 -0.88 -0.76 10.9 79 6 9 1 2 2 0 0  U 35 0 G 47 0 A 48 0 A 49 0 G 50 0 G 51 0 U 63 0
G 64 0 C 65 0 G 66 0 U 108 0 U 109 0 C 110 0 C
111 0 A 114 0 G 116 0 C 124 0 U 125 0 A 128 0 A
129 0 A 151 0 A 174 0 G 175 0 U 176 0 A 177 0 C
208 0 G 213 0 U 214 0 G 223 0 U 224 0 G 225 0 A
226 0 C 440 0 A 441 0 A 442 0 C 443 0 A 459 0 G
464 0 U 647 0 G 648 0 U 649 0 C 650 0 U 651 0 G
724 0 C 725 0 G 740 0 C 741 0 G 742 0 C 757 0 A
758 0 C 759 0 G 941 0 U 942 0 G 944 0 U 945 0 C
946 0 U 947 0 C 1015 0 U 1017 0 A 1018 0 C 1019 0
A 1020 0 C 1033 0 G 1034 0 G 1036 0 G 1037 0 U
1673 0 U 2387 0 C 2396 0 G 100 9 G 101 9
22 1.95 2.18 243.0 -1.00 -0.62 12.2 82 10 5 3 3 3 0 0  G 958 0 C 959 0 G 960 0 U 1001 0 G 1002 0 U 1003
0 U 2330 0 C 2331 0 C 2334 0 C 2335 0 G 2336 0 G
2337 0 G 2338 0 G 2344 0 A 2345 0 C 2346 0 C 2347
0 C 2348 0 G 2349 0 G 2350 0 C 2351 0 G 2352 0 A
2353 0 C 15 9 C 67 9 G 68 9 A 77 9 G 78 9 U 79 9
A 80 9 C 96 9 U 97 9 C 98 9 U 99 9 G 100 9 A 105
9 U 106 9 C 107 9
23 1.93 1.93 255.0 -0.97 -0.74 11.1 82 9 5 2 2 1 2 0  U 1120 0 G 1121 0 G 1131 0 A 1132 0 A 1133 0 G
1223 0 G 1224 0 C 1225 0 G 1226 0 C 1227 0 A 1230
0 A 1231 0 A 1232 0 G 1235 0 A 1236 0 A 1729 0 G
1730 0 A 2083 0 C 2084 0 U 2550 0 C 2551 0 C 2552
0 A 2577 0 G 2578 0 U 2655 0 G 2657 0 G 2658 0 U
2659 0 U 2669 0 G 2670 0 A 2677 0 A 2678 0 G 2679
0 G 2809 0 A 2812 0 A 2813 0 G 2829 0 U 2830 0 C
2831 0 C 2832 0 C 2833 0 C 2835 0 G 2836 0 U 2837
0 A 2838 0 G 2842 0 C 2844 0 G 2845 0 C 2846 0 A
2852 0 U 2853 0 A 2854 0 C 2897 0 G 2898 0 A 2899
0 G 2900 0 C 2901 0 G 78 9 U 79 9 A 80 9 G 90 9 C
91 9 G 92 9 C 95 9 C 96 9 U 97 9 C 98 9 U 99 9 G
100 9
24 2.07 2.07 252.1 -0.77 -0.75 6.7 89 9 1 6 1 0 0 0  U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A 597 0 C
598 0 G 607 0 A 608 0 U 609 0 A 635 0 G 636 0 C
637 0 C 638 0 A 639 0 G 640 0 A 788 0 C 789 0 A
827 0 G 828 0 A 829 0 G 830 0 U 831 0 C 839 0 U
845 0 A 846 0 C 847 0 C 848 0 C 849 0 U 850 0 C
1320 0 A 1321 0 G 1322 0 G 1323 0 G 1324 0 G 1325
0 C 1326 0 G 1331 0 C 1332 0 U 1333 0 A 1355 0 A
1356 0 A 1357 0 C 1360 0 C 1361 0 U 1362 0 G 1363
0 G 1364 0 A 1406 0 A 1407 0 U 1408 0 G 1535 0 C
1536 0 C 1537 0 U 1539 0 A 1581 0 C 1582 0 U 1583
0 G 1595 0 U 1596 0 G 1600 0 G 1601 0 A 1607 0 G
1608 0 A 1642 0 C 1643 0 U 1645 0 G 1646 0 G 1647
0 G 1648 0 G 1649 0 A 1682 0 G 1695 0 U 1696 0 G
1697 0 U 1698 0 C 1699 0 C 1700 0 A 1701 0 G 1837
0 U 1838 0 C 2056 0 A 2099 0 A 2100 0 A 2103 0 C
2644 0 U 2645 0 G 2646 0 MG 8063 0 NA 8579 0 ERY
9000 0
25 1.82 1.99 275.8 -1.04 -0.73 11.7 82 6 7 1 1 1 1 0  G 740 0 C 741 0 G 928 0 A 929 0 C 930 0 C 931 0 U
932 0 C 933 0 C 934 0 G 935 0 C 936 0 G 1031 0 A
1032 0 C 1033 0 G 1034 0 C 1035 0 G 1036 0 G 1037
0 G 1269 0 U 1270 0 A 1271 0 C 1272 0 U 1279 0 A
1280 0 C 1281 0 U 1298 0 G 1299 0 A 2332 0 G 2333
0 C 2334 0 C 2335 0 G 2336 0 G 2337 0 G 2338 0 G
2344 0 A 2345 0 C 2346 0 A 2356 0 G 2357 0 U 2358
0 G 2359 0 C 2360 0 A 2361 0 G 2363 0 A 2364 0 U
2384 0 G 2385 0 U 2386 0 U 2387 0 A 2395 0 C 2396
0 G 2397 0 A 2398 0 G 2399 0 G 2400 0 A 2401 0 U
2419 0 G 2420 0 G 2421 0 U 2422 0 C 2423 0 U 2424
0 G 2426 0 C 2427 0
26 2.18 2.14 272.3 -0.85 -0.72 8.6 87 12 3 6 0 1 0 0  U 468 0 U 555 0 C 556 0 C 557 0 U 595 0 C 596 0 A
597 0 C 598 0 G 607 0 A 608 0 U 609 0 A 635 0 G
636 0 C 637 0 C 638 0 A 639 0 G 640 0 A 767 0 U
768 0 C 769 0 C 770 0 G 771 0 G 772 0 A 773 0 A
844 0 U 866 0 A 867 0 G 868 0 G 869 0 A 882 0 U
883 0 G 887 0 U 888 0 C 889 0 C 1320 0 A 1321 0 G
1322 0 G 1323 0 G 1324 0 G 1325 0 C 1326 0 G 1331
0 C 1332 0 U 1333 0 A 1355 0 A 1356 0 A 1357 0 C
1360 0 C 1361 0 U 1362 0 G 1363 0 G 1364 0 A 1459
0 G 1460 0 U 1461 0 C 1474 0 G 1475 0 A 1476 0 C
1477 0 U 1478 0 G 1479 0 C 1856 0 A 1857 0 A 1858
0 A 1859 0 C 1861 0 C 1862 0 G 1863 0 G 1867 0 G
1868 0 A 1869 0 C 1870 0 U 1871 0 C 1872 0 C 2056
0 G 2125 0 C 2126 0 C 2241 0 U 2242 0 C 2247 0 C
2248 0 G 2254 0 A 2255 0 G 2256 0 G 2257 0 A 2260
0 C 2261 0 C 2262 0 MG 8063 0 NA 8563 0
27 1.39 1.39 283.9 -0.94 -0.72 12.2 85 9 9 1 4 0 0 0  C 31 0 G 33 0 U 35 0 G 50 0 C 58 0 C 62 0 U 63 0
C 85 0 A 86 0 A 151 0 A 174 0 U 176 0 A 177 0 C
208 0 G 213 0 U 214 0 G 223 0 U 224 0 G 225 0 A
226 0 C 440 0 A 441 0 A 442 0 C 443 0 A 459 0 C
461 0 A 462 0 A 463 0 G 464 0 G 479 0 C 480 0 A
497 0 G 514 0 U 647 0 G 648 0 U 649 0 C 650 0 U
651 0 G 724 0 C 725 0 G 740 0 C 741 0 G 742 0 C
757 0 A 758 0 C 759 0 G 941 0 U 942 0 G 944 0 U
945 0 C 946 0 U 947 0 C 1015 0 U 1017 0 A 1018 0
C 1019 0 A 1020 0 C 1033 0 G 1034 0 G 1036 0 G
1037 0 A 1424 0 G 1441 0 A 1442 0 G 1443 0 U 2387
0 C 2396 0 G 100 9 G 101 9
28 1.26 1.26 299.2 -0.90 -0.76 11.5 83 9 13 3 3 2 0 0  U 35 0 G 41 0 C 42 0 U 43 0 A 49 0 G 50 0 U 63 0
G 64 0 C 65 0 C 103 0 A 104 0 A 151 0 A 174 0 G
175 0 U 176 0 A 177 0 G 185 0 C 208 0 G 213 0 U
214 0 G 223 0 U 224 0 G 225 0 A 226 0 C 239 0 C
240 0 A 241 0 A 242 0 A 243 0 C 244 0 C 245 0 G
246 0 G 264 0 U 265 0 G 266 0 G 267 0 U 268 0 G
269 0 C 276 0 C 287 0 A 288 0 C 355 0 G 358 0 U
359 0 C 433 0 U 434 0 A 435 0 C 440 0 A 441 0 A
442 0 C 443 0 A 459 0 G 464 0 U 647 0 G 648 0 U
649 0 C 650 0 U 651 0 G 724 0 C 725 0 G 740 0 C
741 0 G 742 0 C 757 0 A 758 0 C 759 0 G 941 0 U
942 0 G 944 0 U 945 0 C 946 0 U 947 0 C 1015 0 U
1017 0 A 1018 0 C 1019 0 A 1020 0 C 1033 0 G 1034
0 G 1036 0 G 1037 0 U 2387 0 C 2396 0 G 100 9 G
101 9
29 1.82 1.83 323.8 -0.80 -0.72 9.3 86 8 5 3 3 2 0 0  A 542 0 G 543 0 U 555 0 C 556 0 C 557 0 C 558 0 G
568 0 A 569 0 C 583 0 C 594 0 U 595 0 C 596 0 A
597 0 C 598 0 G 615 0 G 958 0 C 959 0 G 960 0 U
1001 0 G 1002 0 U 1003 0 A 1092 0 G 1093 0 G 1094
0 U 1095 0 G 1223 0 G 1224 0 C 1251 0 A 1252 0 C
1253 0 C 1254 0 A 1255 0 C 1256 0 C 1257 0 G 1258
0 A 1259 0 U 2330 0 C 2331 0 C 2334 0 C 2335 0 G
2336 0 G 2337 0 G 2338 0 G 2344 0 A 2345 0 C 2346
0 C 2347 0 C 2348 0 G 2349 0 G 2350 0 C 2351 0 G
2352 0 A 2353 0 C 15 9 C 67 9 G 68 9 A 77 9 U 79
9 A 80 9 G 88 9 C 95 9 C 96 9 U 97 9 A 105 9 U
106 9 C 107 9
30 2.10 2.10 322.6 -0.64 -0.76 6.6 81 7 3 2 3 1 0 0  A 788 0 C 789 0 A 827 0 G 828 0 A 829 0 G 830 0 U
831 0 C 839 0 U 845 0 A 846 0 C 847 0 C 848 0 C
849 0 U 850 0 U 1120 0 G 1121 0 C 1129 0 U 1130 0
G 1131 0 A 1132 0 A 1133 0 G 1223 0 G 1224 0 C
1225 0 G 1226 0 C 1227 0 A 1230 0 A 1232 0 U 1237
0 C 1238 0 A 1406 0 A 1407 0 U 1408 0 G 1535 0 C
1536 0 C 1537 0 U 1539 0 A 1581 0 C 1582 0 U 1583
0 G 1595 0 U 1596 0 G 1600 0 G 1601 0 A 1607 0 G
1608 0 A 1642 0 C 1643 0 U 1645 0 G 1646 0 G 1647
0 G 1648 0 G 1649 0 A 1682 0 G 1695 0 U 1696 0 G
1697 0 U 1698 0 C 1699 0 C 1700 0 A 1701 0 G 1837
0 U 1838 0 G 2068 0 G 2102 0 A 2103 0 A 2486 0 C
2487 0 A 2488 0 G 2489 0 A 2490 0 G 2491 0 U 2492
0 G 2524 0 G 2525 0 U 2527 0 U 2528 0 G 2529 0 C
2530 0 G 2540 0 U 2541 0 C 2542 0 C 2608 0 G 2618
0 UR3 2619 0 U 2620 0 C 2644 0 U 2645 0 G 2646 0
MG 8025 0 NA 8571 0 NA 8579 0 ERY 9000 0 G 78 9 U
79 9 A 80 9 G 90 9 C 91 9 G 92 9 C 95 9 C 96 9 U
97 9 C 98 9 U 99 9 G 100 9
31 1.34 1.34 31.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1159 0 G 1160 0 A 1161 0 G 1162 0 G 1163 0 U
1164 0 G 1175 0 C 1184 0 U 1185 0 U 1187 0 A 1191
0 A 1192 0 A 1193 0 G 1203 0 C 1204 0
32 1.18 1.18 35.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1159 0 G 1160 0 A 1161 0 G 1175 0 C 1176 0 A
1177 0 G 1197 0 U 1198 0 A 1200 0 C 1201 0 A 1202
0 G 1203 0 C 1204 0 U 1205 0
33 1.51 1.51 36.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 1159 0 G 1160 0 A 1161 0 G 1162 0 U 1164 0 A
1166 0 G 1175 0 C 1176 0 C 1179 0 U 1180 0 A 1181
0 C 1182 0 A 1192 0 A 1193 0 A 1194 0 G 1203 0 C
1204 0

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer