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PDBsum entry 1vsa
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Tunnel analysis for: 1vsa calculated with  MOLE 2.0
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PDB id
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1vsa
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.93 |
2.53 |
18.4 |
2.60 |
1.00 |
3.5 |
74 |
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1 |
0 |
0 |
6 |
2 |
0 |
0 |
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2 |
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1.75 |
1.92 |
18.6 |
1.89 |
0.73 |
4.5 |
73 |
1 |
1 |
0 |
7 |
1 |
0 |
0 |
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3 |
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2.11 |
3.54 |
20.1 |
3.14 |
1.11 |
2.8 |
72 |
1 |
0 |
0 |
10 |
1 |
0 |
0 |
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4 |
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2.34 |
2.44 |
25.3 |
2.09 |
0.57 |
3.5 |
79 |
0 |
2 |
0 |
10 |
2 |
0 |
0 |
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5 |
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1.43 |
1.61 |
30.8 |
1.89 |
0.37 |
2.4 |
82 |
1 |
0 |
0 |
11 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program