PDBsum entry 1vs7 Go to PDB code:  Pore analysis for: 1vs7 calculated with MOLE 2.0 PDB id 1vs7 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   31 pores, coloured by radius 29 pores, coloured by radius 29 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.11 2.11 29.6 -0.44 -0.67 6.5 66 2 0 0 1 0 0 0  U 989 A C 990 A U 991 A A 994 A C 995 A G 1006 A A 1016 A U 1017 A G 1018 A C 1037 A C 1038 A G 1039 A U 1040 A 2 3.66 3.66 33.5 -1.79 -0.33 18.0 75 4 0 2 1 1 0 0  A 996 A C 1037 A C 1045 A A 1046 A G 1047 A A 1204 A U 1205 A G 1206 A G 1207 A MG 1566 A 3 2.61 2.61 47.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  G 671 A U 672 A A 673 A G 674 A A 675 A A 676 A U 677 A U 678 A C 679 A C 680 A A 681 A G 682 A G 683 A G 703 A A 704 A G 705 A A 706 A U 707 A C 708 A U 709 A G 710 A G 711 A A 712 A G 713 A G 714 A G 774 A G 775 A G 776 A A 777 A U 801 A 4 4.11 4.11 53.4 -0.41 -0.79 3.4 50 0 0 0 0 1 0 0  A 51 A C 52 A A 116 A G 117 A U 118 A A 119 A U 252 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A A 270 A U 317 A G 318 A G 319 A A 320 A A 321 A U 1424 A U 1425 A G 1426 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A C 1467 A A 1468 A 5 2.06 2.09 80.7 -0.93 -0.72 10.4 88 4 2 2 2 1 0 0  C 1243 A G 1244 A A 1254 A G 1255 A A 1256 A A 1257 A G 1258 A C 1259 A G 1260 A A 1269 A G 1270 A C 1284 A A 1285 A U 1286 A A 1288 A A 1299 A G 1300 A U 1301 A C 1303 A G 1304 A G 1305 A C 1325 A U 1326 A C 1327 A G 1331 A A 1333 A U 1354 A G 1355 A G 1356 A A 1357 A C 1359 A G 1361 A A 1362 A MG 1571 A 6 1.38 1.38 104.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 65 A G 68 A G 69 A U 70 A A 71 A A 72 A C 73 A A 74 A G 75 A G 76 A A 77 A A 78 A G 79 A G 86 A C 87 A U 88 A U 89 A U 91 A U 92 A U 93 A C 95 A U 96 A G 97 A C 153 A U 154 A C 169 A U 170 A A 171 A G 200 A G 201 A G 202 A G 211 A G 212 A A 456 A G 457 A U 458 A A 459 A A 468 A C 469 A C 470 A 7 2.24 2.24 107.2 -0.98 -0.72 11.2 81 5 1 1 1 1 0 0  A 51 A C 52 A A 116 A G 117 A U 118 A C 163 A G 164 A G 165 A U 166 A G 177 A C 178 A C 193 A C 314 A A 315 A C 316 A U 317 A G 318 A G 319 A A 320 A C 328 A A 329 A U 333 A C 334 A C 335 A A 336 A G 337 A G 348 A A 349 A G 350 A G 351 A U 1424 A U 1425 A A 1446 A A 1447 A C 1448 A A 1456 A G 1457 A G 1458 A G 1459 A C 1460 A MG 1564 A 8 2.02 2.12 115.2 -0.91 -0.75 9.2 85 4 1 2 0 0 1 0  U 653 A G 654 A A 655 A G 656 A U 657 A C 658 A U 659 A C 660 A G 661 A U 662 A G 664 A A 665 A G 666 A G 667 A G 668 A G 669 A G 670 A G 671 A U 672 A C 679 A C 680 A A 712 A G 713 A G 714 A A 715 A G 733 A G 734 A C 736 A C 737 A C 738 A U 740 A C 744 A G 745 A A 746 A G 748 A G 774 A G 775 A G 776 A A 777 A C 806 A C 826 A U 827 A U 828 A G 829 A U 850 A G 851 A 9 1.16 1.21 118.8 -1.07 -0.69 11.9 87 7 0 1 1 1 0 0  U 1118 A C 1119 A C 1128 A C 1129 A U 1148 A A 1155 A G 1178 A A 1179 A C 1243 A G 1244 A C 1245 A A 1246 A U 1247 A A 1248 A C 1249 A A 1250 A A 1251 A A 1280 A C 1281 A C 1282 A A 1285 A U 1286 A A 1287 A A 1288 A U 1301 A C 1303 A G 1304 A G 1305 A U 1326 A C 1327 A G 1331 A 10 2.51 2.54 114.4 -1.18 -0.60 14.1 84 6 2 2 3 2 0 0  G 165 A U 166 A G 177 A C 178 A C 193 A G 258 A C 269 A A 270 A G 1435 A U 1436 A A 1437 A G 1438 A G 1439 A U 1440 A A 1441 A A 1446 A A 1447 A C 1448 A A 1456 A G 1457 A G 1458 A G 1459 A C 1460 A G 1461 A C 1462 A 11 2.44 2.45 124.8 -0.62 -0.69 8.1 84 4 1 0 2 1 0 0  U 133 A G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A A 223 A U 224 A G 257 A G 258 A G 259 A G 260 A U 261 A A 262 A U 268 A C 269 A A 270 A A 321 A C 322 A G 324 A A 325 A G 326 A C 328 A A 382 A G 454 A G 455 A A 456 A U 458 A A 459 A A 468 A C 469 A C 470 A U 471 A U 472 A U 1436 A A 1437 A G 1438 A MG 1585 A 12 1.20 1.27 140.0 -1.04 -0.70 12.1 88 9 2 1 3 0 0 0  U 1118 A C 1119 A C 1128 A C 1129 A U 1148 A A 1155 A G 1178 A A 1179 A G 1244 A C 1245 A A 1246 A U 1247 A A 1248 A C 1249 A A 1250 A A 1251 A A 1254 A G 1255 A A 1256 A A 1257 A G 1258 A C 1259 A G 1260 A A 1269 A G 1270 A A 1280 A C 1281 A C 1282 A C 1284 A A 1285 A U 1286 A A 1287 A A 1288 A C 1325 A U 1326 A C 1327 A U 1354 A G 1355 A G 1356 A A 1357 A C 1359 A G 1361 A A 1362 A MG 1571 A 13 2.24 2.24 137.2 -0.41 -0.71 5.6 79 2 0 0 3 0 0 0  A 50 A A 51 A C 52 A A 116 A G 117 A G 242 A A 243 A U 244 A C 286 A U 287 A U 317 A A 338 A G 668 A G 669 A G 670 A G 671 A U 672 A C 679 A C 680 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A A 759 A G 760 A G 761 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A G 775 A G 776 A A 777 A C 806 A A 807 A C 810 A C 811 A G 812 A C 882 A C 883 A G 895 A C 896 A C 897 A G 903 A U 904 A U 905 A A 906 A A 907 A A 908 A A 909 A G 1423 A U 1424 A C 1479 A 14 1.79 1.95 135.3 -0.71 -0.63 6.5 80 3 1 4 4 2 2 0  U 5 A A 7 A A 50 A A 51 A C 52 A A 116 A G 117 A A 119 A U 239 A G 240 A U 287 A A 288 A C 290 A U 291 A G 292 A G 293 A U 294 A G 297 A G 299 A A 300 A G 301 A G 302 A U 304 A G 305 A U 317 A A 338 A U 565 A G 566 A C 611 A A 630 A U 632 A A 860 A G 861 A C 862 A C 876 A G 1423 A U 1424 A 15 2.56 2.57 137.9 -0.57 -0.71 7.0 89 4 1 0 2 0 0 0  A 51 A C 52 A A 116 A G 117 A U 118 A A 119 A A 120 A U 121 A G 122 A U 133 A G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A A 223 A U 224 A C 233 A U 252 A U 261 A A 262 A A 263 A G 265 A C 267 A U 268 A U 317 A G 318 A G 319 A A 320 A C 322 A G 324 A A 325 A G 326 A A 327 A C 328 A A 382 A G 454 A G 455 A A 456 A U 458 A A 459 A A 468 A C 469 A C 470 A U 471 A U 472 A U 1424 A U 1425 A G 1426 A MG 1585 A 16 2.34 2.35 162.2 -0.49 -0.60 7.9 87 5 0 2 3 1 0 0  C 58 A A 59 A G 61 A U 62 A A 65 A A 72 A G 97 A A 98 A C 99 A G 100 A A 101 A G 102 A U 103 A U 150 A A 151 A A 152 A C 163 A G 164 A G 165 A U 166 A G 177 A C 178 A C 193 A G 201 A G 202 A A 383 A G 384 A C 385 A C 386 A A 456 A G 457 A U 458 A A 459 A A 468 A C 469 A C 470 A U 1445 A A 1446 A A 1447 A C 1448 A A 1456 A G 1457 A G 1458 A G 1459 A 17 1.75 1.74 165.2 -1.49 -0.60 16.1 82 15 6 8 2 3 1 0  U 828 A A 860 A G 861 A C 862 A C 1045 A A 1046 A G 1047 A G 1058 A C 1059 A U 1060 A U 1070 A C 1071 A G 1072 A U 1075 A U 1076 A G 1077 A U 1078 A G 1079 A A 1081 A A 1082 A G 1193 A U 1194 A C 1195 A A 1197 A C 1203 A A 1204 A U 1205 A G 1206 A G 1207 A MG 1562 A MG 1566 A 18 1.79 1.86 174.2 -0.70 -0.67 6.2 78 4 1 4 2 3 3 0  U 5 A A 7 A A 119 A A 120 A U 121 A G 122 A G 237 A A 238 A U 239 A G 240 A G 241 A U 252 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A A 270 A C 277 A G 278 A G 281 A A 282 A U 283 A C 284 A G 292 A G 293 A U 294 A G 297 A G 299 A A 300 A G 301 A G 302 A U 304 A G 319 A A 320 A A 321 A U 565 A G 566 A C 611 A A 630 A U 632 A A 860 A G 861 A C 862 A C 876 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A 19 2.05 2.07 170.9 -0.76 -0.66 9.8 83 10 0 1 5 1 0 0  A 119 A A 120 A U 121 A G 122 A G 237 A U 252 A G 257 A G 258 A G 259 A C 267 A U 268 A C 269 A A 270 A C 277 A G 278 A A 279 A C 280 A G 281 A A 282 A U 283 A C 284 A G 319 A A 320 A A 321 A G 581 A C 582 A A 583 A G 584 A G 668 A G 669 A G 670 A G 671 A U 672 A C 679 A C 680 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A G 761 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A G 775 A G 776 A A 777 A C 806 A A 807 A G 809 A C 810 A C 811 A U 1436 A A 1437 A G 1438 A A 1465 A C 1466 A 20 1.77 1.81 202.5 -0.87 -0.62 9.1 81 10 3 5 4 3 2 0  U 5 A A 7 A G 105 A C 106 A G 128 A A 129 A A 131 A C 132 A U 133 A G 134 A C 135 A A 174 A C 175 A G 177 A C 178 A C 193 A C 222 A A 223 A U 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A U 231 A G 299 A A 300 A G 324 A A 325 A U 565 A G 566 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 628 A A 629 A A 630 A C 631 A U 632 A A 860 A G 861 A C 862 A C 876 A A 1446 A A 1447 A C 1448 A A 1456 A G 1457 A G 1458 A 21 1.70 1.68 209.4 -0.96 -0.69 10.3 85 9 2 5 3 1 1 0  U 678 A C 679 A C 680 A A 681 A G 682 A G 683 A G 690 A G 691 A U 692 A G 693 A C 699 A G 700 A G 703 A A 704 A G 705 A C 779 A U 788 A U 789 A A 790 A G 791 A A 792 A G 799 A G 926 A C 1045 A A 1046 A G 1047 A C 1054 A G 1058 A C 1059 A U 1060 A U 1194 A C 1195 A A 1196 A A 1197 A C 1203 A A 1204 A U 1205 A G 1206 A G 1207 A C 1397 A A 1398 A C 1400 A G 1401 A C 1402 A C 1403 A A 1493 A G 1494 A U 1498 A G 1505 A U 1506 A KSG 1543 A MG 1566 A 22 1.76 1.73 210.1 -0.79 -0.65 10.2 85 10 3 4 5 0 0 0  U 14 A G 15 A A 50 A A 51 A C 52 A A 116 A G 117 A G 242 A C 286 A U 287 A U 317 A A 338 A G 527 A C 528 A U 562 A A 573 A A 574 A U 884 A G 885 A G 886 A G 887 A G 888 A A 889 A G 890 A A 907 A A 908 A A 909 A A 915 A U 916 A G 917 A C 1045 A A 1046 A G 1047 A G 1058 A C 1059 A U 1060 A U 1194 A C 1195 A A 1196 A A 1197 A C 1203 A A 1204 A U 1205 A G 1206 A G 1207 A A 1394 A C 1397 A C 1403 A C 1404 A G 1423 A U 1424 A C 1479 A U 1490 A G 1491 A C 1510 A MG 1549 A MG 1566 A MG 1575 A 23 1.77 1.82 211.1 -0.70 -0.65 7.3 83 5 4 4 4 2 2 0  U 5 A A 7 A G 128 A A 129 A A 131 A C 132 A U 133 A G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A U 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A U 231 A G 299 A A 300 A A 382 A G 454 A G 455 A A 456 A U 458 A A 459 A A 468 A C 469 A C 470 A U 471 A U 472 A U 565 A G 566 A A 602 A U 603 A G 604 A U 605 A G 606 A A 608 A G 628 A A 629 A A 630 A C 631 A U 632 A A 860 A G 861 A C 862 A C 876 A 24 1.79 1.79 233.2 -0.94 -0.72 10.1 85 10 3 4 2 0 0 0  U 14 A G 15 A G 527 A C 528 A G 668 A G 669 A G 670 A G 671 A U 672 A C 679 A C 680 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A A 766 A A 767 A C 770 A G 771 A U 772 A G 774 A G 775 A G 776 A A 777 A A 781 A U 801 A A 802 A G 803 A U 804 A C 805 A C 806 A A 807 A C 808 A G 809 A C 810 A G 886 A G 887 A G 888 A G 890 A U 891 A A 900 A A 901 A G 902 A A 915 A U 916 A C 1045 A A 1046 A G 1047 A G 1058 A C 1059 A U 1060 A U 1194 A C 1195 A A 1196 A A 1197 A C 1203 A A 1204 A U 1205 A G 1206 A G 1207 A C 1397 A C 1403 A C 1404 A G 1405 A G 1487 A G 1488 A U 1490 A G 1491 A C 1510 A G 1514 A G 1515 A G 1516 A A 1519 A C 1520 A MG 1547 A MG 1549 A MG 1566 A MG 1574 A 25 2.10 2.12 249.1 -0.68 -0.64 9.6 87 10 1 1 7 0 0 0  A 120 A U 121 A U 123 A C 124 A U 125 A G 126 A G 127 A G 128 A A 129 A A 131 A C 132 A U 133 A G 134 A C 135 A U 137 A G 138 A A 139 A U 140 A U 218 A U 219 A G 220 A C 221 A C 222 A U 224 A C 225 A G 226 A G 227 A A 228 A U 229 A G 230 A U 231 A C 233 A C 234 A C 235 A A 236 A G 237 A A 238 A U 239 A G 278 A A 279 A C 280 A G 281 A A 282 A A 382 A G 454 A G 455 A A 456 A U 458 A A 459 A A 468 A C 469 A C 470 A U 471 A U 472 A G 581 A C 582 A A 583 A G 584 A U 605 A G 668 A G 669 A G 670 A G 671 A U 672 A C 679 A C 680 A A 712 A G 713 A G 714 A A 715 A C 732 A G 733 A G 761 A U 762 A G 763 A C 764 A G 765 A A 766 A A 767 A G 774 A G 775 A G 776 A A 777 A C 806 A A 807 A G 809 A C 810 A C 811 A 26 2.03 2.13 271.6 -0.77 -0.51 12.0 83 11 4 5 8 4 2 0  U 678 A C 679 A C 680 A A 681 A G 682 A G 683 A G 690 A G 691 A U 692 A G 693 A C 699 A G 700 A G 703 A A 704 A G 705 A C 779 A G 799 A G 929 A C 930 A C 931 A C 932 A G 1089 A U 1090 A C 1172 A U 1173 A G 1174 A G 1175 A G 1241 A C 1243 A G 1244 A C 1245 A U 1247 A A 1288 A A 1289 A G 1290 A U 1291 A G 1292 A C 1293 A G 1294 A U 1295 A U 1301 A C 1303 A G 1304 A G 1305 A U 1326 A C 1327 A G 1331 A G 1379 A U 1380 A U 1381 A C 1533 A A 1534 A 27 1.85 2.09 317.1 -0.89 -0.60 12.2 85 12 4 5 10 2 2 0  G 722 A U 723 A U 828 A G 829 A G 830 A A 831 A G 832 A G 833 A A 845 A G 846 A G 847 A C 848 A G 849 A U 850 A G 929 A C 930 A C 931 A C 932 A G 1089 A U 1090 A C 1172 A U 1173 A G 1174 A G 1175 A G 1241 A C 1243 A G 1244 A C 1245 A U 1247 A A 1288 A A 1289 A G 1290 A U 1291 A G 1292 A C 1293 A G 1294 A U 1295 A U 1301 A C 1303 A G 1304 A G 1305 A U 1326 A C 1327 A G 1331 A G 1379 A U 1380 A U 1381 A C 1533 A A 1534 A 28 1.20 1.30 333.8 -1.00 -0.54 13.9 82 18 4 3 11 2 2 0  U 678 A C 679 A C 680 A A 681 A G 682 A G 683 A G 690 A G 691 A U 692 A G 693 A C 699 A G 700 A G 703 A A 704 A G 705 A C 779 A G 799 A G 929 A C 930 A C 931 A C 932 A G 1089 A U 1090 A U 1118 A C 1119 A G 1127 A C 1128 A C 1129 A G 1138 A G 1139 A C 1140 A U 1148 A C 1172 A U 1173 A G 1174 A G 1175 A G 1178 A A 1179 A A 1246 A U 1247 A A 1248 A C 1249 A A 1251 A A 1280 A C 1281 A C 1282 A U 1291 A G 1292 A G 1379 A U 1380 A U 1381 A C 1533 A A 1534 A 29 1.21 1.22 39.7 1.58 0.51 5.8 84 2 2 0 14 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.