PDBsum entry 1vs7 Go to PDB code:  Tunnel analysis for: 1vs7 calculated with MOLE 2.0 PDB id 1vs7 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 tunnels, coloured by tunnel radius 1 tunnel, coloured by tunnel radius 1 tunnel, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.23 1.59 213.3 -1.06 -0.67 10.8 77 8 2 5 3 3 3 0  U 5 A G 6 A A 7 A C 295 A U 296 A G 297 A G 299 A A 300 A U 565 A G 566 A G 567 A G 568 A C 569 A C 611 A C 612 A C 613 A G 615 A A 621 A A 622 A C 623 A U 625 A A 630 A U 632 A G 654 A A 655 A G 656 A U 657 A C 658 A U 659 A C 660 A G 661 A U 662 A G 664 A A 665 A U 717 A A 718 A C 719 A C 720 A G 721 A G 733 A G 734 A C 735 A C 736 A C 737 A C 738 A U 740 A C 744 A G 745 A G 821 A U 822 A C 823 A G 824 A A 825 A G 852 A C 853 A U 871 A A 872 A A 873 A G 874 A U 875 A C 876 A G 877 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.