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PDBsum entry 1vhz
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Pore analysis for: 1vhz calculated with  MOLE 2.0
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PDB id
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1vhz
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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8 pores,
coloured by radius
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8 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.52 |
1.70 |
26.5 |
-1.76 |
-0.48 |
23.9 |
70 |
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2 |
7 |
1 |
2 |
4 |
2 |
0 |
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APR 197 A
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2 |
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1.43 |
1.71 |
34.3 |
-1.31 |
-0.36 |
17.0 |
71 |
2 |
5 |
3 |
3 |
4 |
3 |
0 |
APR 197 A
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3 |
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1.18 |
1.18 |
43.8 |
-0.58 |
-0.28 |
13.4 |
79 |
3 |
5 |
3 |
3 |
4 |
1 |
0 |
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4 |
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1.23 |
1.22 |
57.6 |
-0.80 |
-0.25 |
11.1 |
76 |
3 |
3 |
5 |
6 |
6 |
4 |
0 |
APR 197 A
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5 |
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1.20 |
1.19 |
61.8 |
-0.36 |
-0.07 |
9.9 |
77 |
4 |
3 |
5 |
7 |
6 |
4 |
0 |
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6 |
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1.24 |
1.24 |
65.4 |
-0.26 |
0.04 |
10.0 |
77 |
3 |
2 |
6 |
9 |
8 |
4 |
0 |
APR 197 A
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7 |
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1.48 |
1.60 |
73.3 |
-0.46 |
0.05 |
14.4 |
73 |
6 |
6 |
3 |
9 |
8 |
3 |
0 |
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8 |
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1.46 |
1.67 |
87.1 |
-0.72 |
-0.04 |
12.9 |
72 |
5 |
4 |
5 |
12 |
10 |
6 |
0 |
APR 197 A
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program