PDBsum entry 1vhz Go to PDB code:  Tunnel analysis for: 1vhz calculated with MOLE 2.0 PDB id 1vhz Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.13 1.13 28.1 0.01 -0.19 7.4 91 2 1 4 6 1 1 0   2 1.34 1.52 30.0 0.32 0.18 7.8 83 2 0 2 8 4 0 0   3 1.34 1.52 39.6 1.08 0.49 4.9 86 2 0 3 10 4 0 0   4 1.00 1.50 48.7 -0.81 -0.21 18.1 83 2 5 3 9 1 1 0  APR 197 A 5 1.34 1.51 57.2 -0.41 -0.03 12.8 77 3 2 3 10 4 2 0  APR 197 A 6 1.40 1.55 64.6 0.07 0.18 10.1 78 4 2 4 13 6 3 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.