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PDBsum entry 1vbh
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Pore analysis for: 1vbh calculated with  MOLE 2.0
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PDB id
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1vbh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.23 |
3.17 |
25.9 |
-0.96 |
-0.59 |
6.3 |
79 |
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1 |
0 |
3 |
3 |
0 |
3 |
0 |
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2 |
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1.22 |
1.50 |
31.7 |
-1.15 |
-0.08 |
19.7 |
68 |
3 |
3 |
1 |
5 |
2 |
2 |
0 |
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3 |
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2.16 |
4.28 |
36.0 |
-2.66 |
-0.37 |
37.3 |
80 |
6 |
7 |
1 |
3 |
0 |
4 |
0 |
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4 |
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3.12 |
3.12 |
36.3 |
-1.11 |
-0.14 |
22.3 |
87 |
4 |
5 |
2 |
3 |
1 |
1 |
0 |
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5 |
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2.69 |
2.93 |
38.0 |
-0.82 |
-0.28 |
20.0 |
88 |
4 |
6 |
2 |
3 |
1 |
1 |
0 |
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6 |
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2.01 |
4.31 |
41.5 |
-1.56 |
-0.28 |
26.9 |
88 |
7 |
4 |
2 |
4 |
1 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program