PDBsum entry 1vbe Go to PDB code:  Pore analysis for: 1vbe calculated with MOLE 2.0 PDB id 1vbe Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.45 45.7 -1.44 -0.69 14.0 87 4 3 5 3 1 1 0   2 1.11 2.76 56.0 -1.37 -0.55 13.6 86 4 4 5 4 1 4 0   3 1.10 1.10 56.5 -1.08 -0.50 9.6 84 3 3 5 6 1 5 0   4 1.75 1.86 66.8 -1.48 -0.69 16.1 89 4 5 6 3 0 2 0   5 1.24 1.46 69.1 -1.56 -0.65 15.0 84 5 5 5 3 1 2 0   6 1.40 1.41 78.6 -1.67 -0.73 15.7 88 4 5 6 2 0 2 0   7 1.24 1.45 78.9 -1.86 -0.67 15.4 85 6 4 7 2 1 2 0   8 1.37 1.47 30.0 -0.06 0.05 7.9 80 1 4 3 7 1 2 0   9 1.97 1.99 30.0 0.85 0.66 8.4 79 3 1 0 9 3 1 0  J78 500 1 10 2.04 2.07 33.2 1.57 0.80 1.6 76 0 1 0 12 5 0 0  J78 500 1 Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.