PDBsum entry 1vbc Go to PDB code:  Pore analysis for: 1vbc calculated with MOLE 2.0 PDB id 1vbc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.89 2.00 28.2 -0.25 0.10 12.3 71 2 1 0 2 3 3 0  J77 500 1 2 2.00 2.02 34.6 0.68 0.61 10.3 78 3 2 0 8 5 1 0  J77 500 1 3 2.09 2.79 49.8 -1.48 -0.51 13.4 85 3 2 5 3 1 2 0  J77 500 1 4 1.34 1.52 73.9 -0.32 -0.08 11.8 77 0 4 4 9 3 2 2   5 1.36 2.77 46.5 -0.76 -0.50 9.9 87 3 3 4 6 1 4 0   6 1.79 1.85 51.1 -0.81 -0.40 15.3 85 2 3 3 5 0 2 0   7 1.37 2.77 52.1 -0.75 -0.27 10.9 83 3 3 3 6 1 4 0   8 1.38 2.77 62.9 -1.22 -0.55 11.5 87 4 3 5 3 1 3 0   9 1.88 1.89 69.5 -1.26 -0.62 16.4 90 3 4 5 5 0 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.