PDBsum entry 1v8b Go to PDB code:  Pore analysis for: 1v8b calculated with MOLE 2.0 PDB id 1v8b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   15 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 2.62 27.0 -0.06 0.01 14.4 76 6 0 2 4 2 0 0  NAD 501 A 2 1.27 2.56 38.7 -2.61 -0.41 31.5 79 6 5 5 3 2 0 0   3 1.29 2.65 44.9 -2.49 -0.30 27.1 81 6 5 7 3 2 0 0   4 1.45 2.72 48.2 -0.62 -0.19 15.6 79 5 4 4 4 3 1 0   5 1.22 2.59 48.4 -0.93 -0.12 19.0 80 5 4 3 5 4 0 0   6 1.68 2.03 61.6 -0.66 -0.21 16.7 77 7 5 3 4 4 0 0  NAD 501 C 7 1.17 1.31 79.1 -1.81 -0.45 21.8 78 11 4 7 3 5 1 0   8 1.18 1.24 79.5 -1.86 -0.44 23.4 78 12 4 7 3 5 1 0   9 1.64 3.16 86.0 -1.05 -0.20 16.3 76 10 3 4 4 3 2 0  NAD 501 C 10 1.23 1.41 104.6 -2.03 -0.44 27.1 80 17 8 9 6 4 1 0   11 1.19 1.39 110.8 -1.63 -0.33 22.4 79 15 9 7 6 6 0 0  NAD 501 D 12 1.20 1.27 110.0 -1.86 -0.41 23.6 79 14 9 8 6 6 0 0  NAD 501 A 13 1.30 2.26 110.3 -1.66 -0.37 22.0 79 14 9 8 6 6 0 0   14 1.21 1.66 165.7 -1.79 -0.34 25.4 79 23 16 12 9 9 0 0  NAD 501 A NAD 501 D 15 1.20 2.65 30.5 -1.20 -0.13 17.0 88 5 1 4 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.