PDBsum entry 1v8b Go to PDB code:  Tunnel analysis for: 1v8b calculated with MOLE 2.0 PDB id 1v8b Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   8 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 0.85 3.95 95.0 -0.85 -0.18 18.4 77 13 6 6 10 3 1 0  NAD 501 A 2 1.12 1.13 113.3 -1.09 -0.23 19.1 79 14 8 8 9 6 1 0  NAD 501 D 3 1.15 1.15 117.7 -1.15 -0.26 18.5 79 12 8 10 9 6 1 0   4 1.10 1.10 124.5 -1.38 -0.28 20.1 80 12 8 10 9 6 1 0   5 1.53 1.67 22.8 -0.81 -0.38 14.1 84 2 3 2 3 2 1 0   6 1.07 1.07 24.4 -0.88 -0.42 12.8 90 3 3 1 3 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.