PDBsum entry 1toc Go to PDB code:  Pore analysis for: 1toc calculated with MOLE 2.0 PDB id 1toc Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.21 3.18 66.2 -1.83 -0.72 24.2 86 6 9 2 3 0 2 1   2 3.42 3.74 67.2 -1.73 -0.27 26.9 81 7 6 1 5 2 1 0   3 2.57 3.53 70.0 -1.37 -0.48 18.6 82 6 9 5 6 3 2 1   4 2.87 4.23 122.5 -2.04 -0.41 27.5 79 13 10 3 5 3 3 0   5 1.40 1.50 144.5 -1.61 -0.33 23.9 86 8 7 5 5 2 0 0   6 2.35 2.81 29.8 -1.78 -0.71 19.3 90 3 3 2 0 0 2 1   7 1.43 1.40 52.7 -1.38 -0.56 15.4 81 4 8 6 0 3 2 2   8 2.40 3.93 57.5 -1.54 -0.71 16.8 92 8 4 3 4 0 2 0   9 2.33 2.80 66.1 -1.73 -0.73 19.1 89 6 7 4 2 0 4 1   10 1.22 1.42 79.3 -1.53 -0.63 16.3 86 8 7 9 1 3 2 2   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.