PDBsum entry 1toc Go to PDB code:  Tunnel analysis for: 1toc calculated with MOLE 2.0 PDB id 1toc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.29 1.44 17.3 -0.64 -0.08 12.3 74 2 1 1 2 2 0 0   2 1.27 1.38 18.9 -0.65 -0.17 9.4 74 3 1 1 2 2 0 0   3 1.14 1.27 16.6 -2.78 -0.82 25.1 78 2 2 2 0 1 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.