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PDBsum entry 1t5a
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Pore analysis for: 1t5a calculated with  MOLE 2.0
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PDB id
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1t5a
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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20 pores,
coloured by radius
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20 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.68 |
1.83 |
57.9 |
-2.25 |
-0.40 |
31.3 |
80 |
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11 |
4 |
2 |
2 |
1 |
1 |
0 |
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GOL 704 C
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2 |
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1.74 |
3.00 |
61.4 |
-1.42 |
-0.44 |
21.8 |
87 |
7 |
5 |
4 |
3 |
1 |
1 |
0 |
PO4 534 D MG 604 D GOL 705 D GOL 707 D
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3 |
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1.56 |
1.73 |
64.6 |
-2.42 |
-0.43 |
29.4 |
78 |
10 |
7 |
3 |
3 |
2 |
2 |
0 |
GOL 705 D
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4 |
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1.66 |
1.82 |
76.7 |
-1.52 |
-0.40 |
23.9 |
81 |
8 |
9 |
4 |
6 |
2 |
2 |
0 |
PO4 534 A MG 601 A GOL 704 A
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5 |
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1.63 |
1.82 |
85.8 |
-2.53 |
-0.43 |
31.3 |
79 |
14 |
8 |
5 |
3 |
2 |
2 |
0 |
GOL 705 D
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6 |
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1.83 |
1.98 |
89.9 |
-1.87 |
-0.44 |
28.0 |
82 |
14 |
9 |
5 |
3 |
1 |
1 |
0 |
PO4 534 A MG 601 A GOL 704 A GOL 704 C
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7 |
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1.59 |
1.79 |
97.1 |
-2.15 |
-0.41 |
24.9 |
78 |
12 |
10 |
6 |
6 |
4 |
2 |
0 |
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8 |
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1.22 |
1.33 |
109.5 |
-1.96 |
-0.33 |
27.1 |
80 |
13 |
10 |
5 |
7 |
1 |
1 |
1 |
GOL 709 D
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9 |
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0.97 |
1.37 |
156.7 |
-1.81 |
-0.33 |
24.5 |
81 |
17 |
10 |
7 |
9 |
2 |
1 |
1 |
FBP 532 A GOL 706 A
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10 |
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1.19 |
1.10 |
166.0 |
-1.71 |
-0.31 |
23.9 |
80 |
18 |
10 |
9 |
8 |
2 |
2 |
1 |
GOL 705 B GOL 709 D
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11 |
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1.05 |
1.33 |
166.5 |
-2.12 |
-0.35 |
25.9 |
81 |
18 |
10 |
10 |
6 |
3 |
2 |
0 |
FBP 532 A GOL 706 A GOL 709 D
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12 |
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1.34 |
2.14 |
203.5 |
-1.72 |
-0.34 |
26.0 |
79 |
21 |
11 |
3 |
13 |
0 |
2 |
2 |
GOL 704 C GOL 708 C
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13 |
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1.22 |
1.23 |
212.0 |
-1.75 |
-0.36 |
23.3 |
80 |
22 |
9 |
8 |
7 |
1 |
3 |
1 |
GOL 704 C GOL 708 C GOL 709 D
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14 |
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0.86 |
1.22 |
217.6 |
-1.40 |
-0.23 |
21.0 |
80 |
23 |
9 |
9 |
10 |
4 |
2 |
1 |
FBP 532 A GOL 703 A GOL 706 A GOL 704 B GOL 705 B
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15 |
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1.20 |
1.27 |
232.9 |
-1.34 |
-0.23 |
21.4 |
79 |
21 |
11 |
9 |
13 |
4 |
5 |
2 |
GOL 705 A GOL 705 B
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16 |
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1.89 |
2.49 |
271.1 |
-1.38 |
-0.27 |
23.1 |
79 |
28 |
12 |
7 |
13 |
1 |
3 |
2 |
GOL 705 B GOL 704 C GOL 708 C
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17 |
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1.48 |
1.62 |
290.2 |
-1.66 |
-0.33 |
24.3 |
80 |
26 |
16 |
10 |
13 |
3 |
5 |
1 |
FBP 532 A GOL 706 A GOL 708 C
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18 |
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1.26 |
1.49 |
283.4 |
-1.55 |
-0.32 |
22.8 |
79 |
28 |
12 |
8 |
15 |
3 |
5 |
2 |
GOL 705 A GOL 704 C GOL 708 C
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19 |
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1.39 |
1.70 |
25.5 |
-0.55 |
0.03 |
15.5 |
82 |
4 |
2 |
0 |
3 |
1 |
0 |
0 |
GOL 705 C FBP 532 D GOL 706 D
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20 |
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1.37 |
1.71 |
29.6 |
-0.37 |
-0.27 |
8.0 |
90 |
4 |
2 |
4 |
3 |
1 |
0 |
0 |
GOL 705 C FBP 532 D GOL 706 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program