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PDBsum entry 1t5a
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Tunnel analysis for: 1t5a calculated with  MOLE 2.0
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PDB id
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1t5a
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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9 tunnels,
coloured by
tunnel radius
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9 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.25 |
3.15 |
43.1 |
-0.21 |
0.01 |
12.2 |
70 |
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5 |
0 |
2 |
7 |
4 |
0 |
0 |
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2 |
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1.23 |
2.91 |
46.2 |
-0.74 |
-0.06 |
16.4 |
72 |
6 |
1 |
2 |
6 |
4 |
0 |
0 |
GOL 706 A
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3 |
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1.24 |
2.79 |
51.6 |
-0.45 |
0.07 |
16.1 |
74 |
7 |
3 |
4 |
8 |
4 |
0 |
0 |
GOL 709 D
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4 |
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1.23 |
3.04 |
52.8 |
-0.73 |
-0.01 |
17.6 |
74 |
7 |
3 |
4 |
8 |
4 |
0 |
0 |
GOL 707 C GOL 709 C
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5 |
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1.24 |
1.45 |
61.1 |
-0.01 |
0.11 |
13.9 |
80 |
7 |
4 |
4 |
9 |
3 |
0 |
0 |
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6 |
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1.18 |
1.55 |
62.2 |
-0.16 |
0.16 |
14.8 |
77 |
9 |
3 |
4 |
10 |
5 |
1 |
0 |
GOL 708 C
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7 |
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1.29 |
1.58 |
19.5 |
-0.69 |
-0.71 |
6.6 |
97 |
1 |
1 |
4 |
2 |
0 |
0 |
0 |
FBP 532 D
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8 |
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1.27 |
1.27 |
20.0 |
-0.84 |
-0.39 |
14.4 |
78 |
3 |
0 |
1 |
3 |
1 |
0 |
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FBP 532 D
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9 |
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1.29 |
1.58 |
20.6 |
0.13 |
-0.01 |
7.9 |
81 |
2 |
2 |
0 |
5 |
1 |
0 |
0 |
GOL 705 C FBP 532 D GOL 706 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program