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PDBsum entry 1s9f
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Pore analysis for: 1s9f calculated with  MOLE 2.0
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PDB id
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1s9f
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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13 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.88 |
1.89 |
35.7 |
-1.44 |
-0.22 |
20.7 |
84 |
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7 |
2 |
1 |
3 |
1 |
0 |
0 |
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DDY 4012 C DT 12 G DA 13 G DA 7 K DG 8 K
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2 |
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2.54 |
2.57 |
43.8 |
-0.29 |
-0.01 |
16.1 |
89 |
5 |
0 |
3 |
3 |
0 |
0 |
0 |
DG 4 G DG 8 G DG 9 G DC 11 G DT 12 G DA 4 K DG 5
K DT 6 K DA 7 K DG 8 K DT 9 K DC 10 K DC 11 K
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3 |
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2.18 |
2.18 |
47.2 |
-1.44 |
-0.59 |
15.2 |
79 |
3 |
1 |
2 |
1 |
2 |
0 |
0 |
DG 4 G DT 12 G DG 8 K DT 9 K DC 10 K DC 11 K
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4 |
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1.20 |
1.41 |
83.8 |
-1.92 |
-0.50 |
17.7 |
72 |
4 |
4 |
2 |
2 |
2 |
1 |
0 |
DT 12 G DT 2 K DC 3 K DA 4 K
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5 |
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2.63 |
2.63 |
30.1 |
0.72 |
0.51 |
17.2 |
93 |
4 |
0 |
2 |
5 |
0 |
0 |
0 |
DG 5 E DG 8 E DG 9 E DA 10 E DC 11 E DA 4 I DT 6
I DA 7 I DG 8 I DT 9 I DC 10 I DC 11 I
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6 |
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1.96 |
1.96 |
36.0 |
-1.92 |
-0.40 |
21.1 |
81 |
5 |
3 |
3 |
1 |
3 |
0 |
0 |
DG 5 E DT 12 E DG 8 I DT 9 I DC 10 I DC 11 I
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7 |
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1.82 |
1.83 |
48.2 |
-1.50 |
-0.33 |
16.8 |
82 |
5 |
1 |
2 |
2 |
2 |
0 |
0 |
DDY 4010 A DG 8 E DG 9 E DA 10 E DC 11 E DT 12 E
DA 13 E DA 4 I DA 7 I DG 8 I DC 15 I
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8 |
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1.85 |
1.89 |
50.5 |
-1.36 |
-0.41 |
16.1 |
91 |
5 |
1 |
4 |
3 |
1 |
0 |
0 |
DDY 4010 A DG 8 E DG 9 E DA 10 E DC 11 E DT 12 E
DA 13 E DA 4 I DA 7 I DG 8 I DC 15 I
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9 |
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1.56 |
1.68 |
29.6 |
-1.14 |
-0.08 |
14.5 |
82 |
3 |
0 |
1 |
2 |
1 |
0 |
0 |
DDY 4011 B DT 12 F DA 13 F DG 5 J DT 6 J DA 7 J
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10 |
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2.56 |
2.58 |
39.3 |
0.08 |
0.17 |
16.4 |
92 |
4 |
0 |
2 |
2 |
0 |
0 |
0 |
DG 4 F DG 8 F DG 9 F DC 11 F DA 4 J DG 5 J DT 6 J
DA 7 J DG 8 J DT 9 J DC 10 J DC 11 J
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11 |
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2.05 |
2.95 |
41.5 |
-1.48 |
-0.39 |
16.4 |
74 |
5 |
4 |
2 |
1 |
4 |
0 |
0 |
DT 12 F DA 7 J DG 8 J DT 9 J DC 10 J DC 11 J
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12 |
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1.65 |
1.65 |
33.0 |
-1.92 |
-0.32 |
25.4 |
82 |
5 |
4 |
0 |
2 |
1 |
0 |
0 |
CA 4004 D DDY 4013 D DA 13 H DG 5 L DT 6 L DA 7 L
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13 |
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2.48 |
2.48 |
50.1 |
-1.13 |
-0.20 |
22.5 |
88 |
6 |
2 |
3 |
3 |
0 |
0 |
0 |
MG 4006 D DDY 4013 D DG 8 H DG 9 H DC 11 H DT 12
H DA 13 H DA 4 L DT 6 L DA 7 L DG 8 L DT 9 L DC
10 L DC 11 L
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14 |
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1.90 |
2.00 |
51.2 |
-1.60 |
-0.60 |
18.4 |
69 |
5 |
2 |
0 |
0 |
2 |
0 |
0 |
DG 3 H DG 4 H DG 9 H DA 10 H DC 10 L DC 11 L DT
12 L DT 13 L DC 14 L
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15 |
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1.91 |
1.99 |
53.8 |
-1.45 |
-0.62 |
16.9 |
79 |
5 |
2 |
2 |
1 |
1 |
0 |
0 |
DG 9 H DA 10 H DC 11 H DT 12 H DA 7 L DG 8 L DT 9
L DC 10 L DC 11 L DT 12 L DT 13 L DC 14 L
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16 |
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2.27 |
2.26 |
70.0 |
-1.59 |
-0.47 |
16.7 |
73 |
7 |
4 |
2 |
1 |
4 |
1 |
0 |
DG 3 H DG 4 H DT 12 H DA 7 L DG 8 L DT 9 L DC 10
L DC 11 L DT 12 L
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17 |
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2.53 |
2.53 |
28.1 |
-2.11 |
-0.51 |
22.0 |
80 |
3 |
3 |
3 |
1 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program