PDBsum entry 1s1d Go to PDB code:  Pore analysis for: 1s1d calculated with MOLE 2.0 PDB id 1s1d Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   2 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 4.42 27.9 -1.95 -0.54 25.8 86 5 2 4 3 1 0 0  TRS 5007 A TRS 5004 B 2 1.57 4.44 28.0 -1.84 -0.46 25.1 86 5 2 4 3 1 0 0  TRS 5002 A TRS 5007 A 3 1.41 1.63 31.1 -1.06 -0.20 10.3 79 5 0 5 4 3 1 0  TRS 5002 A TRS 5007 A TRS 5004 B 4 1.18 2.95 31.5 -1.33 -0.24 14.2 81 6 1 5 5 2 1 0  TRS 5002 A TRS 5007 A TRS 5004 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.