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PDBsum entry 1s1d
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Tunnel analysis for: 1s1d calculated with  MOLE 2.0
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PDB id
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1s1d
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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8 tunnels,
coloured by
tunnel radius
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8 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.36 |
1.55 |
23.2 |
-0.51 |
-0.20 |
14.6 |
87 |
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1 |
3 |
2 |
2 |
1 |
0 |
1 |
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TRS 5001 A
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2 |
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1.58 |
3.65 |
16.6 |
-3.55 |
-0.86 |
47.7 |
84 |
3 |
7 |
1 |
0 |
0 |
0 |
0 |
GP2 4001 A
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3 |
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1.21 |
1.86 |
19.7 |
-3.35 |
-0.47 |
41.3 |
76 |
6 |
4 |
1 |
0 |
2 |
0 |
0 |
GP2 4001 A
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4 |
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1.21 |
1.90 |
20.5 |
-3.37 |
-0.69 |
42.6 |
83 |
4 |
4 |
1 |
0 |
1 |
0 |
0 |
GP2 4001 A
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5 |
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1.28 |
1.35 |
23.1 |
-0.48 |
-0.26 |
13.2 |
86 |
1 |
4 |
2 |
2 |
1 |
0 |
1 |
TRS 5003 B
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6 |
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1.52 |
1.75 |
17.8 |
-1.92 |
-0.33 |
23.0 |
70 |
4 |
1 |
0 |
2 |
2 |
2 |
0 |
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7 |
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1.70 |
1.78 |
18.8 |
-1.85 |
-0.30 |
25.0 |
79 |
3 |
2 |
0 |
1 |
1 |
1 |
0 |
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8 |
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1.53 |
1.76 |
23.8 |
-1.74 |
-0.32 |
23.9 |
75 |
4 |
2 |
0 |
2 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program