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PDBsum entry 1qws

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 1qws calculated with MOLE 2.0 PDB id
1qws
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.16 29.0 -1.55 -0.57 20.2 79 3 4 1 1 1 1 0  
2 1.66 1.82 40.4 -0.86 -0.24 17.4 79 7 2 0 7 1 5 0  
3 1.11 2.07 78.8 -1.72 -0.44 22.3 82 11 10 4 4 4 1 0  
4 1.41 3.40 83.8 -1.10 -0.29 12.8 82 7 6 7 9 4 4 0  
5 1.45 2.03 91.5 -1.07 -0.20 14.2 81 9 7 7 11 5 5 0  
6 1.60 1.79 145.9 -1.19 -0.26 18.7 79 14 13 3 10 4 7 0  
7 1.35 1.46 175.1 -1.06 -0.42 13.1 82 11 8 6 17 1 8 0  
8 1.37 1.77 191.4 -1.20 -0.26 17.1 79 19 12 5 19 8 10 0  
9 1.26 1.60 308.9 -0.82 -0.20 15.2 80 29 19 12 27 18 10 0  HEM 760 A HEM 760 C
10 1.26 1.51 352.5 -1.13 -0.32 17.0 80 29 25 8 26 8 15 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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