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PDBsum entry 1ph4
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Tunnel analysis for: 1ph4 calculated with  MOLE 2.0
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PDB id
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1ph4
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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5 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
1.65 |
34.8 |
0.63 |
0.02 |
6.9 |
85 |
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3 |
0 |
2 |
6 |
2 |
0 |
0 |
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DG 3 D DG 4 D DT 5 D DG 12 D
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2 |
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1.30 |
1.30 |
15.5 |
0.10 |
0.06 |
13.6 |
94 |
2 |
1 |
2 |
2 |
1 |
0 |
0 |
DC 11 D
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3 |
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1.18 |
1.18 |
17.8 |
-1.94 |
-0.66 |
23.4 |
87 |
2 |
1 |
2 |
1 |
1 |
0 |
0 |
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4 |
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1.15 |
1.43 |
19.4 |
-1.42 |
-0.70 |
20.0 |
85 |
2 |
2 |
1 |
1 |
1 |
0 |
0 |
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5 |
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1.40 |
1.40 |
16.1 |
-2.21 |
-0.55 |
18.1 |
83 |
2 |
1 |
3 |
0 |
2 |
0 |
0 |
DG 2 D
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6 |
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1.35 |
1.35 |
17.4 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
DT 6 G DT 7 G DT 8 G DG 9 G DG 10 G DG 11 H DG 12
H
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program