PDBsum entry 1obj Go to PDB code:  Pore analysis for: 1obj calculated with MOLE 2.0 PDB id 1obj Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.39 1.72 31.0 -1.66 -0.23 23.3 82 6 1 1 3 3 0 0   2 1.38 1.73 40.7 -1.68 -0.18 23.1 80 10 0 0 3 3 0 0   3 1.51 1.51 45.8 -2.08 -0.18 28.6 80 12 0 1 2 4 0 0   4 1.16 2.09 48.2 -0.85 -0.09 17.7 82 7 1 1 6 4 0 1   5 1.14 1.97 53.8 -0.90 -0.04 15.6 83 7 2 1 8 4 0 1   6 1.19 1.95 56.0 -0.41 -0.35 11.3 92 4 3 6 10 0 2 2   7 1.47 1.53 65.2 -1.68 -0.09 24.4 80 13 0 1 5 6 0 0   8 1.21 1.97 69.9 -0.83 -0.03 17.1 82 8 1 1 9 6 0 1   9 1.26 1.83 69.7 -1.22 -0.22 15.8 84 8 3 5 7 4 2 1   10 1.14 1.69 72.7 -1.31 -0.33 16.9 84 9 2 5 6 4 2 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.