PDBsum entry 1nq9 Go to PDB code:  Pore analysis for: 1nq9 calculated with MOLE 2.0 PDB id 1nq9 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.80 2.80 41.0 -1.13 -0.08 10.3 84 4 1 5 3 2 1 0   2 2.05 2.28 41.1 -1.24 -0.13 15.3 85 6 1 5 3 2 1 0   3 1.74 2.89 53.2 -1.69 -0.39 19.3 82 7 5 4 3 1 3 0   4 1.87 2.02 53.3 -1.71 -0.41 21.8 83 8 5 4 3 1 3 0   5 1.63 2.86 38.8 0.04 -0.15 8.8 87 1 2 2 7 0 1 0  NAG 1 B NAG 2 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.