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PDBsum entry 1nq9
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Tunnel analysis for: 1nq9 calculated with  MOLE 2.0
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PDB id
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1nq9
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.28 |
3.22 |
23.8 |
-1.15 |
-0.35 |
13.0 |
79 |
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2 |
2 |
3 |
4 |
1 |
1 |
0 |
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2 |
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1.25 |
2.18 |
27.1 |
-0.32 |
-0.01 |
10.9 |
77 |
2 |
2 |
3 |
5 |
2 |
1 |
0 |
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3 |
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1.30 |
1.94 |
28.5 |
-1.00 |
-0.20 |
7.5 |
77 |
2 |
1 |
3 |
5 |
2 |
1 |
0 |
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4 |
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1.29 |
2.90 |
31.7 |
-0.16 |
0.08 |
6.3 |
75 |
2 |
1 |
3 |
6 |
3 |
1 |
0 |
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5 |
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1.65 |
2.96 |
33.4 |
-0.10 |
0.00 |
8.1 |
87 |
2 |
1 |
2 |
7 |
1 |
1 |
0 |
NAG 1 B NAG 2 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program