PDBsum entry 1nm3 Go to PDB code:  Pore analysis for: 1nm3 calculated with MOLE 2.0 PDB id 1nm3 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.71 1.82 99.2 0.03 0.11 15.6 80 4 3 3 7 3 1 0  MSE 4 A MSE 109 A MSE 139 A 2 1.70 1.82 116.6 -0.50 -0.17 17.4 84 3 5 4 5 3 1 0  MSE 4 A MSE 109 A MSE 139 A 3 1.14 1.53 91.9 -0.08 0.09 8.2 66 3 2 1 4 5 4 1  MSE 4 B MSE 109 B MSE 111 B MSE 139 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.