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PDBsum entry 1n4q

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Transferase PDB id
1n4q
Contents
Protein chains
(+ 0 more) 314 a.a. *
(+ 0 more) 346 a.a. *
Ligands
LYS-CYS-VAL-ILE-
LEU
×6
MGM ×6
GER
Metals
_CL ×7
_ZN ×6
Waters ×1117
* Residue conservation analysis

References listed in PDB file
Key reference
Title Structure of mammalian protein geranylgeranyltransferase type-I.
Authors J.S.Taylor, T.S.Reid, K.L.Terry, P.J.Casey, L.S.Beese.
Ref. Embo J, 2003, 22, 5963-5974.
PubMed id 14609943
Abstract
Protein geranylgeranyltransferase type-I (GGTase-I), one of two CaaX prenyltransferases, is an essential enzyme in eukaryotes. GGTase-I catalyzes C-terminal lipidation of >100 proteins, including many GTP- binding regulatory proteins. We present the first structural information for mammalian GGTase-I, including a series of substrate and product complexes that delineate the path of the chemical reaction. These structures reveal that all protein prenyltransferases share a common reaction mechanism and identify specific residues that play a dominant role in determining prenyl group specificity. This hypothesis was confirmed by converting farnesyltransferase (15-C prenyl substrate) into GGTase-I (20-C prenyl substrate) with a single point mutation. GGTase-I discriminates against farnesyl diphosphate (FPP) at the product turnover step through the inability of a 15-C FPP to displace the 20-C prenyl-peptide product. Understanding these key features of specificity is expected to contribute to optimization of anti-cancer and anti-parasite drugs.
PROCHECK
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 Headers

 

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