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PDBsum entry 1kx5

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Top Page protein dna_rna metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 1kx5 calculated with MOLE 2.0 PDB id
1kx5
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.18 2.79 133.7 -1.09 -0.43 14.3 83 10 3 7 9 0 1 0  DT 55 I DC 56 I DT 57 I DG 58 I DC 59 I DA 60 I
DC -64 J DA -57 J DG -56 J DA -55 J DT -54 J DA -
53 J DC -52 J
2 1.20 1.20 21.3 -1.28 -0.72 14.1 77 2 0 0 0 0 0 0  DC 43 I DT 44 I DT 45 I DT 46 I DG -43 J DT -
42 J DG -41 J
3 1.21 1.21 21.4 -1.16 -0.73 12.5 77 2 0 0 0 0 0 0  DC 43 I DT 44 I DG -43 J DT -42 J DG -41 J

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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