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PDBsum entry 1kuq

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Pore analysis for: 1kuq calculated with MOLE 2.0 PDB id
1kuq
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.50 2.50 26.8 -1.08 -0.57 11.5 83 3 0 1 1 0 0 0  A 19 B G 21 B G 22 B U 39 B G 40 B G 41 B U 42 B
C 43 B C 55 B U 56 B
2 2.15 2.15 30.0 -0.51 -0.79 4.9 72 1 0 0 0 0 0 0  U 16 B A 17 B G 18 B A 19 B C 20 B G 21 B G 22 B
U 23 B G 24 B G 25 B U 42 B C 43 B C 44 B A 45 B
C 46 B C 47 B C 48 B G 49 B G 51 B
3 2.46 2.53 33.1 -1.90 -0.42 24.2 85 3 0 0 1 0 0 0  G 2 B G 5 B G 13 B U 42 B C 43 B A 52 B C 53 B G
54 B C 55 B U 56 B C 57 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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